DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30060 and mrpl38

DIOPT Version :9

Sequence 1:NP_725293.1 Gene:CG30060 / 246426 FlyBaseID:FBgn0265272 Length:202 Species:Drosophila melanogaster
Sequence 2:XP_005169545.1 Gene:mrpl38 / 405881 ZFINID:ZDB-GENE-040426-2373 Length:386 Species:Danio rerio


Alignment Length:130 Identity:41/130 - (31%)
Similarity:62/130 - (47%) Gaps:3/130 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 PIIRFKADPEHYHTLMMVDLDVP-PDNNTEWLIWMVGNIPGCDVAMGQTLVAYDNRRTIHGSNIH 124
            |.:.::|:.:...||::...|.. .|...|:|.|:||||||..||.|..:..|.......|:.:|
Zfish   208 PHVHYEAEEDSLWTLLLTSPDEHLLDEEQEYLHWLVGNIPGRAVASGDQICPYLCPFPARGTGLH 272

  Fly   125 RIVFLAFKQYLELDFDETFVP-EGEEKGRGTFNCHNFARKYA-LGNPMAANFYLVEWLWRWTPTY 187
            |.:|:.|||...:||.....| ..|...|.:|...:|.||:. |..|....|:..:|....|.|:
Zfish   273 RFIFILFKQDALVDFGSDVRPVPCESLKRRSFQTLDFYRKHQDLITPAGLAFFQCQWDQSVTQTF 337

  Fly   188  187
            Zfish   338  337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30060NP_725293.1 PEBP_euk 34..177 CDD:176644 38/118 (32%)
mrpl38XP_005169545.1 PEBP_euk 179..327 CDD:176644 38/118 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1557122at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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