DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30060 and a5

DIOPT Version :9

Sequence 1:NP_725293.1 Gene:CG30060 / 246426 FlyBaseID:FBgn0265272 Length:202 Species:Drosophila melanogaster
Sequence 2:NP_476998.1 Gene:a5 / 33317 FlyBaseID:FBgn0011294 Length:210 Species:Drosophila melanogaster


Alignment Length:165 Identity:53/165 - (32%)
Similarity:82/165 - (49%) Gaps:3/165 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LKRHHVIPRLFACKPTKVISVLYPCDIDIKPGIMVVINETLKQPIIRFKADPEHYHTLMMVDLDV 82
            :|...|||.:....|.:::.:.|...|||:.|......|...||.:.:.||||.::|::|:..|.
  Fly    30 MKEMEVIPEILDEPPRELLRIKYDNTIDIEEGKTYTPTELKFQPRLDWNADPESFYTVLMICPDA 94

  Fly    83 PPDNN---TEWLIWMVGNIPGCDVAMGQTLVAYDNRRTIHGSNIHRIVFLAFKQYLELDFDETFV 144
            |...|   ..||.|:|.|:||.|:..||.:..|........|.|.|.:.|.::|..:|||||..:
  Fly    95 PNRENPMYRSWLHWLVVNVPGLDIMKGQPISEYFGPLPPKDSGIQRYLILVYQQSDKLDFDEKKM 159

  Fly   145 PEGEEKGRGTFNCHNFARKYALGNPMAANFYLVEW 179
            ......|...|:...|.:||.:|:|:|.|.:...|
  Fly   160 ELSNADGHSNFDVMKFTQKYEMGSPVAGNIFQSRW 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30060NP_725293.1 PEBP_euk 34..177 CDD:176644 47/145 (32%)
a5NP_476998.1 PEBP_euk 47..192 CDD:176644 47/144 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452401
Domainoid 1 1.000 87 1.000 Domainoid score I2734
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 47 1.000 Inparanoid score I473
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D117065at6960
OrthoFinder 1 1.000 - - FOG0000438
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11362
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X275
88.000

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