DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30060 and mRpL38

DIOPT Version :9

Sequence 1:NP_725293.1 Gene:CG30060 / 246426 FlyBaseID:FBgn0265272 Length:202 Species:Drosophila melanogaster
Sequence 2:NP_511152.2 Gene:mRpL38 / 32375 FlyBaseID:FBgn0030552 Length:416 Species:Drosophila melanogaster


Alignment Length:189 Identity:50/189 - (26%)
Similarity:76/189 - (40%) Gaps:25/189 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 KLVTELKRHHVIPRLFACK---PTKVISVLYPCDID----IKPGIMVVINETLKQPIIRFK--AD 68
            :||.:  .:.:...||...   |...:::.|..|.|    :..|.::...|..|.|.|.|.  .|
  Fly   124 RLVAD--HYGIFEHLFGSAYFVPRVPLNISYQLDGDSLAPVYNGNVIKPTEAAKAPQIDFDGLVD 186

  Fly    69 P--------EHYHTLMMVDLDVPPDNNT-EWLIWMVGNIPGCDVAMGQTLVAYDNRRTIHGSNIH 124
            |        :.|.||:..:.|....|.| |.|.|.:.|||...|:.||.|..|.......|....
  Fly   187 PITGQAAGQDTYWTLVASNPDAHYTNGTAECLHWFIANIPNGKVSEGQVLAEYLPPFPPRGVGYQ 251

  Fly   125 RIVFLAFKQYLELDFDETFVPEGEEKG---RGTFNCHNFARKYALG-NPMAANFYLVEW 179
            |:||:.:||...||.. ::.....:.|   :.||:..:|.|::... .|....||...|
  Fly   252 RMVFVLYKQQARLDLG-SYQLAAADYGNLEKRTFSTLDFYRQHQEQLTPAGLAFYQTNW 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30060NP_725293.1 PEBP_euk 34..177 CDD:176644 44/161 (27%)
mRpL38NP_511152.2 PEBP_euk 146..307 CDD:176644 44/161 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452389
Domainoid 1 1.000 44 1.000 Domainoid score I727
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1557122at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11362
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.950

Return to query results.
Submit another query.