DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30060 and Pbp2

DIOPT Version :10

Sequence 1:NP_725293.1 Gene:CG30060 / 246426 FlyBaseID:FBgn0265272 Length:202 Species:Drosophila melanogaster
Sequence 2:NP_001099226.1 Gene:Pbp2 / 246145 RGDID:621707 Length:187 Species:Rattus norvegicus


Alignment Length:77 Identity:18/77 - (23%)
Similarity:31/77 - (40%) Gaps:13/77 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 IIDGMHHEKEGEASQALAAAMKLLAVESHHRPEADQ--FPMARLKQILTAMLSTECLNK-----H 169
            :.|.:...:.|...:.|.|:..|..::.:.|.|.:|  .|.|....|      .||.:|     |
  Rat    14 LADAVKSNRVGPNLRILDASWYLPKMKRNPRAEFEQTHIPGASFFDI------DECCDKSSEFDH 72

  Fly   170 LFNRFLEYASYL 181
            :.....|:|.|:
  Rat    73 MLPTKGEFADYV 84

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30060NP_725293.1 PEBP_euk 34..177 CDD:176644 15/71 (21%)
Pbp2NP_001099226.1 PEBP_euk 23..171 CDD:176644 17/68 (25%)

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