DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30060 and C56G2.4

DIOPT Version :9

Sequence 1:NP_725293.1 Gene:CG30060 / 246426 FlyBaseID:FBgn0265272 Length:202 Species:Drosophila melanogaster
Sequence 2:NP_498385.2 Gene:C56G2.4 / 175894 WormBaseID:WBGene00016979 Length:538 Species:Caenorhabditis elegans


Alignment Length:114 Identity:27/114 - (23%)
Similarity:41/114 - (35%) Gaps:22/114 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 NETLKQPIIRFKADPEHYHTLMMVDLDVPPDNNTEWLIWMVGNIPGCDVAMGQTLVAYDNRRTI- 118
            ||.....||    |..|.| |..:::|:|..|              .:.|.|..|...|....| 
 Worm   359 NEKFSLAII----DAHHGH-LHWLEVDIPAAN--------------LNAANGNGLTKADYVPLIP 404

  Fly   119 -HGSNIHRIVFLAFKQYLELDFDETFVPEGEEKGRGTFNCHNFARKYAL 166
             ..|..|..:|:...|...:...|::. ||..:.|..|....|.:::.|
 Worm   405 KKPSTCHSYLFVLLAQPASMQTLESYC-EGMCETRKKFRLELFKQQHGL 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30060NP_725293.1 PEBP_euk 34..177 CDD:176644 27/114 (24%)
C56G2.4NP_498385.2 PEBP <374..454 CDD:294157 20/94 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11362
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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