DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30060 and pebp4

DIOPT Version :10

Sequence 1:NP_725293.1 Gene:CG30060 / 246426 FlyBaseID:FBgn0265272 Length:202 Species:Drosophila melanogaster
Sequence 2:XP_005170845.3 Gene:pebp4 / 101882266 -ID:- Length:195 Species:Danio rerio


Alignment Length:194 Identity:46/194 - (23%)
Similarity:76/194 - (39%) Gaps:57/194 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 LFACKPTKV-----------------ISVLYPCDIDIKPGIMVVINETLKQPI---------IRF 65
            |.||..||.                 :.|:||   |:.....:::.:.:::.|         :..
Zfish    13 LCACHMTKATCDEPLTAEDAEFCKGGLKVIYP---DLVVDKCLIVPQRMREKISMEWGSPEVLLP 74

  Fly    66 KADPEHYHTLMMVDLDVPPDNN---TEWLIWMVGNIPG-----CDVAMGQTLVAYDNRRTIHGSN 122
            .|:.|..:||:|||.|.|...|   :.|..|::.:|.|     .|| .|..|.||.......|:.
Zfish    75 HAEEEKKYTLVMVDPDAPSRQNPSRSYWRHWLLVDIKGEALQTGDV-RGTELSAYARPTPPKGTG 138

  Fly   123 IHRIVFLAFKQYLELDFDETFVPEG--------EEKGRGTFNCHNFARKYALGNPMAANFYLVE 178
            :||...|.|:|           |||        |.:.||.::...|.:::.|....|:..:|.:
Zfish   139 LHRYQILVFEQ-----------PEGRTPFLNREENRSRGNWDLQAFIQRFGLSGAKASLQFLTQ 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30060NP_725293.1 PEBP_euk 34..177 CDD:176644 41/184 (22%)
pebp4XP_005170845.3 None

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