DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30059 and gnsa

DIOPT Version :9

Sequence 1:NP_610872.1 Gene:CG30059 / 246425 FlyBaseID:FBgn0260475 Length:492 Species:Drosophila melanogaster
Sequence 2:NP_001025379.1 Gene:gnsa / 566506 ZFINID:ZDB-GENE-050107-5 Length:538 Species:Danio rerio


Alignment Length:512 Identity:224/512 - (43%)
Similarity:312/512 - (60%) Gaps:36/512 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 APLIVL---VLACLG----NTASEKL---PNILLILSDDQDVELRGMFPMEHTIEMLGFGGALFH 59
            |||::|   ::.|:.    |.|:.|.   |||:|||:||.||.:.||.|:..|.:::|..|..|.
Zfish     4 APLVLLHCIIVICVTLHCVNLAAAKTNPKPNIVLILTDDLDVSIGGMIPLVKTKKLIGDAGITFT 68

  Fly    60 NAYTPSPICCPARTSLLTGMYAHNHGTRNNSVSGGCYGPHWRRALEPRALPYILQQH-GYNTFFG 123
            ||:..||:|||:|.|:|||.|.|||...||::.|.|....|::..||.|.|..||:| .|.|||.
Zfish    69 NAFVASPLCCPSRASILTGKYPHNHHVVNNTLEGNCSSTAWQKGQEPDAFPAFLQKHAAYQTFFA 133

  Fly   124 GKYLNQY-----WGAGDVPKGWNNFYGLHGNSRYYNYTL----RENTGNVHYESTYLSDLLRDRA 179
            |||||:|     .|...||.||::::.|..||:||||||    |......:|...||:|:|.:.:
Zfish   134 GKYLNEYGSKKAGGVEHVPLGWDHWFALERNSKYYNYTLSVNGRAQRHGQNYSEDYLTDVLANVS 198

  Fly   180 ADFLRNATQSSEPFFAMVAPPAAHEPFTPAPRHEGVFSHIEALRTPSFNQVKQDKHWLVRAARR- 243
            .|||.|.: :..|||.||:.||.|.|:|.||:::..|..::|.|.|:||...:|||||:|.|:. 
Zfish   199 IDFLENKS-NRRPFFMMVSTPAPHSPWTAAPQYDSSFPDLKAPRDPNFNIHGKDKHWLIRQAKTP 262

  Fly   244 LPNETINTIDTYFQKRWETLLAVDELVVTLMGVLNDTQSLENTYIIYTSDNGYHVGQFAQPFDKR 308
            :.|.::..:|..::|||.|||:||:||..|:..|:....|.|||:|:|||||||.|||:.|.|||
Zfish   263 MSNASVEFLDNAYRKRWRTLLSVDDLVEKLVRKLDIRGELSNTYVIFTSDNGYHTGQFSLPMDKR 327

  Fly   309 QPYETDINVPLLIRGPGIAPESHIDTAVSLVDLAPTILAWADID-TPSYMDGQSFHELLLNKRRR 372
            |.||.||.||||:|||.|.|.......::.|||.||||..|..: ..:.|||.||..:::.:...
Zfish   328 QLYEFDIRVPLLVRGPNIKPNQTSPLPIANVDLGPTILDIAGYNVNDTQMDGMSFLPIMVGELNS 392

  Fly   373 VPFFERSLLIEYWGEGTLATFNPECP--WPEKDRLAQCTPAADCHCQDAWNNTYACLRNIRHRED 435
             ..:...:|:||.|||...: :|.||  .|   .:::|.|  ||.|:||:||||||:|.:....:
Zfish   393 -SVWRSDVLVEYEGEGRNVS-DPACPLLGP---GVSECFP--DCVCEDAYNNTYACVRTVSPNAN 450

  Fly   436 RIYCEFRDNENFLEAYDLQLDPFQMTNIA--YDLLPIERALYSLRLKNLTQCSGHSC 490
            ..||||.|||.|:|.|:|..||||::|||  .|...:|:..:  ||..|..|||.||
Zfish   451 LQYCEFDDNEVFVEVYNLTSDPFQLSNIAKSIDQEVLEKMNH--RLMMLQSCSGRSC 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30059NP_610872.1 G6S 24..467 CDD:293766 206/458 (45%)
AslA 24..464 CDD:225661 204/453 (45%)
gnsaNP_001025379.1 AslA 31..480 CDD:225661 205/456 (45%)
G6S 32..482 CDD:293766 206/457 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592851
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H1568
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1273622at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_103483
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
65.700

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