DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30059 and sgsh

DIOPT Version :9

Sequence 1:NP_610872.1 Gene:CG30059 / 246425 FlyBaseID:FBgn0260475 Length:492 Species:Drosophila melanogaster
Sequence 2:NP_001116740.1 Gene:sgsh / 563849 ZFINID:ZDB-GENE-030131-4958 Length:511 Species:Danio rerio


Alignment Length:541 Identity:125/541 - (23%)
Similarity:207/541 - (38%) Gaps:138/541 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IVLVLAC--LGNTASEKLPNILLILSDD----QDVELRGMFPMEHTIEMLGFGGALFHNAYTPSP 66
            ::.:|.|  :|...|.   |:|||::||    .||....:....| :..|.....:|.||:|...
Zfish     9 LLCLLLCFDVGGCRSR---NVLLIIADDGGFETDVYNNTVVQTPH-LRALSKRSLIFKNAFTSVS 69

  Fly    67 ICCPARTSLLTGMYAHNHGTRNNSVSGGCYGPHWRRALE-PRALPYILQQHGYNTFFGGKYLNQY 130
            .|.|:|:::|||:..|.:|     :.|...|.|...:.: .::||.:|::...:|...||   ::
Zfish    70 SCSPSRSTILTGLPQHQNG-----MYGLHQGVHHFNSFDGVQSLPLLLKRANIHTGIIGK---KH 126

  Fly   131 WGAGDV-PKGWNNFYGLHGNSRYYNYTLRENTGN---VHYESTYLSDLLRD--RAADFLRNATQS 189
            .|.|.| |               :::...|.|.:   |....|.:..|:|.  ::....|:.|:.
Zfish   127 VGPGPVYP---------------FDFAYTEETNSVLQVGRNITKIKLLVRKFFQSHKEERSETKE 176

  Fly   190 SEPFFAMVAPPAAHEPFTPAPRHEGVFSHIEAL--------RTPSFNQVKQDKHW---LVRAARR 243
            ..|||..||....|......|:: |||  .|..        |.|.:    :.|::   .|:....
Zfish   177 ERPFFLYVAFHDPHRCGHSQPQY-GVF--CEKFGNGESGMGRIPDW----EPKYYSPDQVKVPYF 234

  Fly   244 LPNETINTIDTYFQKRWETLLAVDELVVTLMGVLNDTQSLENTYIIYTSDNGYHVGQFAQPF--D 306
            :|:......|...|  :.|:..:|:.:..::..|.......:|.:||:||||.       ||  .
Zfish   235 IPDTPAARADIAAQ--YTTVSRLDQGIGLVLEELRKAGFENDTLVIYSSDNGI-------PFPNG 290

  Fly   307 KRQPYETDINVPLLIRGP------GIAPESHIDTAVSLVDLAPTILAWADIDTPSYMDGQSFHEL 365
            :...|.:.:..|:|:..|      |...:::    |||:|:.||||.|..:..|||.        
Zfish   291 RTNLYGSGVKEPMLLSSPEHQQRWGKLSQAY----VSLLDITPTILDWFSLPYPSYS-------- 343

  Fly   366 LLNKRRRVPFFERSLLIEYWGEGTLATFNPECPWP---EKDRLAQCT---PAADCHCQDAWNNTY 424
                      ...|..:|..|...|.....|..|.   ....|.:.|   |....|     ...|
Zfish   344 ----------LSMSQPVELTGRSLLPALISEPSWDTVFSSQSLHEVTMFYPMRSIH-----KGPY 393

  Fly   425 ACLRNIRHR-----EDRIYCE--FRD-----------------NENFL----EAYDLQLDPFQMT 461
            ..|.|:.:|     :...|..  |:|                 ||.:.    |.:|::.||.:..
Zfish   394 RLLHNLHYRMPFPIDQDFYISPTFQDLLNRTQSGRPTGWFKTLNEYYYRQRWELFDVRTDPMEKV 458

  Fly   462 NIAYDL--LPIERALYSLRLK 480
            |:|.||  ..:..:|..|.||
Zfish   459 NLAGDLDYSEVLESLKDLLLK 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30059NP_610872.1 G6S 24..467 CDD:293766 115/506 (23%)
AslA 24..464 CDD:225661 114/503 (23%)
sgshNP_001116740.1 SGSH 25..481 CDD:293751 121/522 (23%)
AslA 25..461 CDD:225661 114/502 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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