DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30059 and Sgsh

DIOPT Version :9

Sequence 1:NP_610872.1 Gene:CG30059 / 246425 FlyBaseID:FBgn0260475 Length:492 Species:Drosophila melanogaster
Sequence 2:NP_650760.1 Gene:Sgsh / 42266 FlyBaseID:FBgn0038660 Length:524 Species:Drosophila melanogaster


Alignment Length:549 Identity:123/549 - (22%)
Similarity:193/549 - (35%) Gaps:170/549 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 NILLILSDDQDVE---LRGMFPMEHTIEMLGFGGALFHNAYTPSPICCPARTSLLTGMYAHNHGT 86
            |:||:|:||...|   ....|.....::.|...|.||:||:|....|.|:|:.||||...|    
  Fly    22 NVLLLLADDAGFESGAYLNKFCQTPNLDALAKRGLLFNNAFTSVSSCSPSRSQLLTGQAGH---- 82

  Fly    87 RNNSVSGGCYGPH-----WRRALEPRALPYILQQHGYNTFFGGKYLNQYWGAGDVPKGWNNFYGL 146
                 |.|.||.|     :....:..:||.:::...     ||:.|:...|...|... |||   
  Fly    83 -----SSGMYGLHQGVHNFNVLPDTGSLPNLIRDQS-----GGRILSGIIGKKHVGAA-NNF--- 133

  Fly   147 HGNSRYYNYTLRENTGNVHYESTYLSDLLRDRAADFLRNATQSSEPFFAMVAPPAAHEP-----F 206
                 .:::...|...:::.....:: .:::.|..||:.|....:|||.||   ..|:|     .
  Fly   134 -----RFDFEQTEEQHSINQIGRNIT-RMKEYARQFLKQAKDEKKPFFLMV---GFHDPHRCGHI 189

  Fly   207 TP---------APRHEGVFSHIEALRTPSFNQVKQDKHWL-VRAARRLPNETINTIDTYFQKRWE 261
            ||         ....||:.|      .|.:..:..|  |. :.....||:..:  :......::.
  Fly   190 TPQFGEFCERWGSGEEGMGS------IPDWKPIYYD--WRNLDVPAWLPDTDV--VRQELAAQYM 244

  Fly   262 TLLAVDELVVTLMGVLNDTQSLENTYIIYTSDNGYHVGQFAQPF--DKRQPYETDINVPLLIRGP 324
            |:..:|:.|..::..|......:.|.:|||||||       .||  .:...||..|..||:|..|
  Fly   245 TISRLDQGVGLMLKELEAAGVADQTLVIYTSDNG-------PPFPGGRTNLYEHGIRSPLIISSP 302

  Fly   325 GIAPESHIDTA--VSLVDLAPTILAWADIDTP------------------------SYMDGQSFH 363
            ......|..||  |||:|:.|:::....|..|                        |.....|:|
  Fly   303 NKEDRHHEATAAMVSLLDIYPSVMDALQIPRPNDTKIVGRSILPVLREEPPIKESDSVFGSHSYH 367

  Fly   364 ELLLNKRRRVPFFERSLL---IEYWGE-------GTLATF---------NPECPWPEKDRLAQCT 409
            |:.:....|:....|..|   |.||.:       .|..||         ....||          
  Fly   368 EVTMAYPMRMVRNRRYKLIHNINYWADFPIDQDFYTSPTFQQILNATLRKQTLPW---------- 422

  Fly   410 PAADCHCQDAWNNTYACLRNIRHREDRIYCEFRDNENFLEAYDLQLDPFQMTNIAYDLLPIERAL 474
                          |..|.....|.:            .|.||::.||.:..|:|      ::|.
  Fly   423 --------------YRSLLQYYQRPE------------WELYDIKTDPLERFNLA------DKAK 455

  Fly   475 YSLRLKNLTQ--------------CSGHS 489
            |:..||.|.:              |:.|:
  Fly   456 YNGTLKQLREQLFDWQVATKDPWRCAPHA 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30059NP_610872.1 G6S 24..467 CDD:293766 116/511 (23%)
AslA 24..464 CDD:225661 115/508 (23%)
SgshNP_650760.1 AslA 17..476 CDD:225661 121/539 (22%)
SGSH 22..471 CDD:293751 121/534 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466497
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3119
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.830

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