DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30059 and Sgsh

DIOPT Version :9

Sequence 1:NP_610872.1 Gene:CG30059 / 246425 FlyBaseID:FBgn0260475 Length:492 Species:Drosophila melanogaster
Sequence 2:NP_061292.2 Gene:Sgsh / 27029 MGIID:1350341 Length:502 Species:Mus musculus


Alignment Length:537 Identity:128/537 - (23%)
Similarity:189/537 - (35%) Gaps:171/537 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IVLVLACLGNTASEKLPNILLILSDDQDVELRGMF-----PMEHTIEMLGFGGALFHNAYTPSPI 67
            |:|||...|..:.    |:|||::||...| .|::     ...| ::.|.....:|.||:|....
Mouse    11 ILLVLGLCGAHSR----NVLLIVADDGGFE-SGVYNNTAIATPH-LDALSRHSLIFRNAFTSVSS 69

  Fly    68 CCPARTSLLTGMYAHNHGTRNNSVSGGCYG-----PHWRRALEPRALPYILQQHGYNT-FFGGKY 126
            |.|:|.|||||:..|.:         |.||     .|:....:.::||.:|.|.|..| ..|.|:
Mouse    70 CSPSRASLLTGLPQHQN---------GMYGLHQDVHHFNSFDKVQSLPLLLNQAGVRTGIIGKKH 125

  Fly   127 LNQYWGAGDVPKGWNNFYGLHGNSRYYNYTLRENTGNVHYESTYLSDLLRDRAADFLRNATQSSE 191
            :           |....|.       :::...|...:|......:: .::.....||:  ||...
Mouse   126 V-----------GPETVYP-------FDFAFTEENSSVMQVGRNIT-RIKQLVQKFLQ--TQDDR 169

  Fly   192 PFFAMVAPPAAHEPFTPAPRHEGVFSHIEALRTPSFNQVKQDKHWLVRAARRLPNETINTID--- 253
            |||..||....|......|:: |.|..       .|...:....:       :|:.|....|   
Mouse   170 PFFLYVAFHDPHRCGHSQPQY-GTFCE-------KFGNGESGMGY-------IPDWTPQIYDPQD 219

  Fly   254 ---TYF-----------QKRWETLLAVDELVVTLM------GVLNDTQSLENTYIIYTSDNGYHV 298
               .||           ..::.|:..:|:.|..::      |||||      |.||:|||||   
Mouse   220 VMVPYFVPDTPAARADLAAQYTTIGRMDQGVGLVLQELRGAGVLND------TLIIFTSDNG--- 275

  Fly   299 GQFAQPFDKRQPYETDINVPLLIRGPGIAPESH-------IDTAVSLVDLAPTILAWADIDTPSY 356
              ...|..:...|......|||:..|     .|       .|..|||:||.||||.|..|..|||
Mouse   276 --IPFPSGRTNLYWPGTAEPLLVSSP-----EHPQRWGQVSDAYVSLLDLTPTILDWFSIPYPSY 333

  Fly   357 ----------------------------MDGQSFHELLLNKRRRVPFFERSLLIEYWGEGTLATF 393
                                        ...||.||:.::...|..:.:...||.        ..
Mouse   334 AIFGSKTIQLTGRSLLPALEAEPLWATVFSSQSHHEVTMSYPMRSVYHQNFRLIH--------NL 390

  Fly   394 NPECPWP-EKDRLAQCTPAADCHCQDAWNNT--------YACLRNIRHREDRIYCEFRDNENFLE 449
            :.:.|:| ::|.....|      .||..|.|        |..|....:||.            .|
Mouse   391 SFKMPFPIDQDFYVSPT------FQDLLNRTTTGRPTGWYKDLHRYYYRER------------WE 437

  Fly   450 AYDLQLDPFQMTNIAYD 466
            .||:..||.:..|:|.|
Mouse   438 LYDISRDPRETRNLAAD 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30059NP_610872.1 G6S 24..467 CDD:293766 123/521 (24%)
AslA 24..464 CDD:225661 121/517 (23%)
SgshNP_061292.2 AslA 20..464 CDD:225661 123/528 (23%)
SGSH 24..472 CDD:293751 123/520 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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