DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30054 and gnav1

DIOPT Version :10

Sequence 1:NP_001036538.3 Gene:CG30054 / 246420 FlyBaseID:FBgn0050054 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_001159486.1 Gene:gnav1 / 571305 ZFINID:ZDB-GENE-081031-92 Length:362 Species:Danio rerio


Alignment Length:356 Identity:139/356 - (39%)
Similarity:211/356 - (59%) Gaps:13/356 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 STEAMEKRRI-NEEIDKQLRLEKKRSKRELKLLLLGACESGKSTFIKQMRIIHGSGYSDEDKRGY 69
            :||..:|.:| :.:||:.|....||....:|:|||||.||||||.:|||:|||..|::.::...:
Zfish    10 TTEEDKKAKIHSSQIDRDLYEYAKRELNVVKILLLGAAESGKSTLVKQMKIIHSHGFTKQELTSF 74

  Fly    70 IKLVFQNIFMAMQSMIKAMDMLKISYGQGEHSELADLVMSIDYETVTTFED-----PYL-NAIKT 128
            ...|..|:..:|:.::..|.:|:|:....::...|..|:|..    ..|::     |:: :|:..
Zfish    75 KPAVLDNLLTSMKFVLHGMGVLRINLANPKNKVHAHSVLSCG----RCFDEDQMLFPFIAHALCC 135

  Fly   129 LWHDAGIQECYDRRREYQLTDSTEYFLGDIGRIEQADYLPTNQDILRAREPTFNITVYPFELDGY 193
            ||.|.|::....|..||:|.||..||..::|||...||:||..|:||.|..|..:....|::...
Zfish   136 LWADPGVRSSAARGYEYELNDSALYFFENMGRIIADDYMPTETDVLRVRLRTTGVIETQFKVKHL 200

  Fly   194 VLSMVDVAGQRTERRKWIHFFSNVTSIIFLAALSEYDQFMMESENDNRLEESKALFHTIITFEWF 258
            |..|.||.||||||||||..|..|.|::|:.:||.||..::|..:.|||:||..||.:|....:|
Zfish   201 VFRMYDVGGQRTERRKWISCFEYVRSVLFVVSLSGYDMTLVEDPSMNRLQESLKLFSSICNNIFF 265

  Fly   259 KNASIILFLNKMDVLEEKIMYS--HLVDYFPEYDGPKQDAYAAREYVLRMFQSISLDTYKKIYSH 321
            :..|:|||:||:|:.:|||::|  ||..|.|::.|...|..||..::..||.|::....|.||.|
Zfish   266 RGTSMILFMNKIDLFQEKILHSGRHLRHYLPQFRGADCDVDAAARFIADMFVSLNASPSKLIYHH 330

  Fly   322 FTCATDTENIKFVFAAVKDTILQCNLKESNL 352
            ||.||||.|::.||..|.|||::.||:..:|
Zfish   331 FTTATDTSNVQVVFQVVMDTIIKENLEAVSL 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30054NP_001036538.3 G-alpha 34..347 CDD:206639 127/320 (40%)
gnav1NP_001159486.1 G-alpha 39..356 CDD:206639 127/320 (40%)

Return to query results.
Submit another query.