DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30054 and gnal

DIOPT Version :10

Sequence 1:NP_001036538.3 Gene:CG30054 / 246420 FlyBaseID:FBgn0050054 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_001007340.1 Gene:gnal / 492467 ZFINID:ZDB-GENE-041114-26 Length:379 Species:Danio rerio


Alignment Length:389 Identity:149/389 - (38%)
Similarity:218/389 - (56%) Gaps:48/389 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MHCCSSTEAME-------KRRINEEIDKQLRLEKKRSKRELKLLLLGACESGKSTFIKQMRIIHG 58
            |.|..:::..:       :|..|::|:|||:.|::..|...:||||||.||||||.:|||||:|.
Zfish     1 MGCLGNSKTEDQRIDEKAQREANKKIEKQLQKERQAYKATHRLLLLGAGESGKSTIVKQMRILHV 65

  Fly    59 SGYSDEDKRGYIKLVFQNIFMAMQSMIKAMDML--KISYGQGEHSELADLVMSI----DYETVTT 117
            :|::.|:|:..|..:.:|:..|:.::|.||..|  .:|.....:...|:.:.||    |::    
Zfish    66 NGFNAEEKKQKILDIRKNVKDAIVTIISAMSTLTPPVSIANPSNQPRAEYIKSIAPLSDFD---- 126

  Fly   118 FEDPYLNAIKTLWHDAGIQECYDRRREYQLTDSTEYFLGDIGRIEQADYLPTNQDILRAREPTFN 182
            :.:.:....|.||.|.|::.|::|..||||.|..:|||..|..:.|.||.||:||:||.|..|..
Zfish   127 YTEEFFEHAKHLWDDEGVKACFERSNEYQLIDCAQYFLERIESVRQNDYTPTDQDLLRCRVLTSG 191

  Fly   183 ITVYPFELDGYVLSMVDVAGQRTERRKWIHFFSNVTSIIFLAALSEYDQFMMESENDNRLEESKA 247
            |....|::|.....|.||.|||.||||||..|::||:|||:||.|.|:..:.|..:.|||.||..
Zfish   192 IFETRFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVAASSSYNMVIREDNSTNRLRESLD 256

  Fly   248 LFHTIITFEWFKNASIILFLNKMDVLEEKIM--YSHLVDYFPEY----------DGPKQDAYAAR 300
            ||.:|.|..:.:..|:||||||.|:|.|||:  .|.|.||||||          ..|.:|...:|
Zfish   257 LFRSIWTNRFLRTISVILFLNKQDMLAEKILAGKSKLEDYFPEYARYTLPPEATPDPGEDPKVSR 321

  Fly   301 -EYVLRMFQSISLDTYKKI-----------YSHFTCATDTENIKFVFAAVKDTILQCNLKESNL 352
             ::.:|       |.:.||           |.|||||.|||||:.||...:|.|.:.:|::..|
Zfish   322 AKFFIR-------DEFLKISTASGTDKHYCYPHFTCAVDTENIRHVFNDCRDIIQRMHLRQYEL 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30054NP_001036538.3 G-alpha 34..347 CDD:206639 137/342 (40%)
gnalNP_001007340.1 G-alpha 41..373 CDD:206639 137/342 (40%)

Return to query results.
Submit another query.