DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmem18 and tmem18

DIOPT Version :10

Sequence 1:NP_725169.3 Gene:Tmem18 / 246418 FlyBaseID:FBgn0050051 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_001005601.1 Gene:tmem18 / 449559 ZFINID:ZDB-GENE-040927-26 Length:152 Species:Danio rerio


Alignment Length:141 Identity:58/141 - (41%)
Similarity:83/141 - (58%) Gaps:10/141 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 INGYWTFLLSIDWKDPWLIGLILAHILTTTTALLSRNSSNFQVFLFLVLLLAVYFTESINEFAAN 75
            |...||||.|:||.:|||:.|:..|:......|||......|:..||:::..||..|.:||.||.
Zfish    22 ITSIWTFLQSVDWSEPWLMALLAFHVFCFAFTLLSCKYYRIQICHFLLMVAMVYSAEYLNELAAM 86

  Fly    76 NWSSFSRQQYFDSNGLFISTVFSIPILLNCMLLIGTWLYNSTQLMVTLKTAQLKERARKERQTKA 140
            ||.|||:.|||||.|:|||.|:|:|:|||.::::..|::.:...|..||..|||.:|.:|.    
Zfish    87 NWRSFSKFQYFDSKGMFISLVYSVPLLLNTVIIVAVWVWRTFSTMTELKILQLKRKAAREN---- 147

  Fly   141 DSESIAHKKAE 151
                  |||.:
Zfish   148 ------HKKTQ 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmem18NP_725169.3 TMEM18 16..133 CDD:405460 51/116 (44%)
tmem18NP_001005601.1 TMEM18 27..144 CDD:405460 51/116 (44%)
DNA-binding. /evidence=ECO:0000250 124..152 11/37 (30%)

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