DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmem18 and Tmem18

DIOPT Version :10

Sequence 1:NP_725169.3 Gene:Tmem18 / 246418 FlyBaseID:FBgn0050051 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_001007749.1 Gene:Tmem18 / 362722 RGDID:1359389 Length:140 Species:Rattus norvegicus


Alignment Length:120 Identity:49/120 - (40%)
Similarity:71/120 - (59%) Gaps:0/120 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LLSIDWKDPWLIGLILAHILTTTTALLSRNSSNFQVFLFLVLLLAVYFTESINEFAANNWSSFSR 82
            ::..||.:|||:||:..|:|.......|......|:..||.|::.||..|.|||.||.||..|::
  Rat    18 IMETDWTEPWLLGLLAFHLLCLLLTCFSAQRYKLQIGHFLCLVVLVYCAEYINEVAAMNWRLFAK 82

  Fly    83 QQYFDSNGLFISTVFSIPILLNCMLLIGTWLYNSTQLMVTLKTAQLKERARKERQ 137
            .|||||.|:|||.|||.|:|.|.|:::..|:..:..:|..||..|.:.:.||.|:
  Rat    83 YQYFDSRGMFISLVFSAPLLFNAMVIVIMWVRKTLTVMSDLKNLQERRKERKRRR 137

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmem18NP_725169.3 TMEM18 16..133 CDD:405460 46/114 (40%)
Tmem18NP_001007749.1 TMEM18 16..127 CDD:405460 45/108 (42%)
DNA-binding. /evidence=ECO:0000250 113..140 7/25 (28%)
Nuclear localization signal. /evidence=ECO:0000250 130..138 3/8 (38%)

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