DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30050 and CG13561

DIOPT Version :9

Sequence 1:NP_725159.2 Gene:CG30050 / 246417 FlyBaseID:FBgn0050050 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_611830.3 Gene:CG13561 / 37765 FlyBaseID:FBgn0034906 Length:176 Species:Drosophila melanogaster


Alignment Length:134 Identity:30/134 - (22%)
Similarity:54/134 - (40%) Gaps:36/134 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 MDCV-GNPNYFANLYCRIIPPKNRTMEASV--NI-----------MQQLSVFSGSLRVSIPNAKK 86
            ::|: .:.|:.....||:...|...:|.|:  ||           ||.|...||        .|.
  Fly    28 IECLSADENFTTVSLCRLYAVKRDVVEMSLRANILRWPKGPVSMRMQLLKKASG--------YKP 84

  Fly    87 VITQIFDITFDVCKVLRERKRKILIDLLVNTLAKNSNAKAWRCPFPKG------KFESRNISVTD 145
            .:..|  ...|||:.| |::....|::::::....:|..  :||.|..      :|.   :.|.|
  Fly    85 FLYNI--CQSDVCEYL-EKRNHPFINIILSSFGNRTNVN--KCPIPPEIVLEHFRFP---VKVLD 141

  Fly   146 LPPM 149
            :.|:
  Fly   142 MMPL 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30050NP_725159.2 DM8 90..177 CDD:214778 15/66 (23%)
CG13561NP_611830.3 DM8 82..173 CDD:214778 16/72 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR20898
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.