DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30049 and Naalad2

DIOPT Version :10

Sequence 1:NP_725142.3 Gene:CG30049 / 246416 FlyBaseID:FBgn0050049 Length:878 Species:Drosophila melanogaster
Sequence 2:NP_001100272.1 Gene:Naalad2 / 300384 RGDID:1305872 Length:778 Species:Rattus norvegicus


Alignment Length:390 Identity:86/390 - (22%)
Similarity:139/390 - (35%) Gaps:114/390 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 YRLP--DRVTMADEPLKPGQFVG-ERAQKILYELDRIGPKVVGSTANEVTTVAFLLNEVEKIRSE 117
            :|||  :.|.:.:.|:.|   :| ..|:::|..|        |.||....:....||....|...
  Rat   307 FRLPVEEAVGIPNIPVHP---IGYNDAERLLRNL--------GGTAPPDQSWKGSLNVSYNIGPG 360

  Fly   118 MRGDLFHLEVDVQQPTGSYVVGTMTSIYQGIQNVVVKLSTASSNSSSYLLINSHFDTKPGSPGAG 182
            ..|..:..:|.:.    .:.:..:|.||.     |:.....|:....|:::..|.|:  ...|..
  Rat   361 FSGSEYSRKVRMH----VHNINKITRIYN-----VIGTIRGSTEPDRYVILGGHRDS--WVFGGI 414

  Fly   183 DDGTMVVVMLEVLRQMSISESEFMHP---IVFLFNGAEENPLQASHGFITQHKWA-PNCK----- 238
            |..|...|:.|:.|......:....|   |:|....|||      .|.:...:|| .|.|     
  Rat   415 DPTTGTAVLQEIARSFGKLVNGGWKPRRTIIFASWDAEE------FGLLGSTEWAEENAKILQER 473

  Fly   239 --AVINLE--VGGN-----------------GGRDILFQSGPNNPWLVK--YYKQHSKHPFASTL 280
              |.||.:  :.||                 ..|:|   |.|::.:..|  |.....|.|  |..
  Rat   474 SIAYINSDSAIEGNYTLRVDCTPLLHQLVYKVAREI---SSPDDGFESKSLYESWLEKDP--SPE 533

  Fly   281 AEEIFQFGILPSDTDFRIFRDYGNIPGLDIA-------------QFSNGYVYHTAFDSFDVVP-- 330
            .:|..:...|.|.:||..:     ...|.||             ::|:..||||.:::|::|.  
  Rat   534 NKERPRINKLGSGSDFEAY-----FQRLGIASGRARYTKNKKTDKYSSYPVYHTIYETFELVQNF 593

  Fly   331 ---------------GRAVQNTGE------NILSLVRALSN-ASELYN-TNEHS---AGHAVFFD 369
                           |..|....:      ||....:||.| |:.::| :.:|.   ..|.|.||
  Rat   594 YDPTFKKQLSVAQLRGALVYELADCVVIPFNIQDYAKALKNYAASIFNLSKKHDQQLRDHGVSFD 658

  Fly   370  369
              Rat   659  658

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30049NP_725142.3 M28_Fxna_like 71..378 CDD:349872 81/373 (22%)
Naalad2NP_001100272.1 Zinc_peptidase_like 86..>143 CDD:472712
PA_GCPII_like 148..374 CDD:239036 18/81 (22%)
M28_PSMA_like <382..623 CDD:349942 55/263 (21%)
TFR_dimer 655..774 CDD:461238 3/4 (75%)
Blue background indicates that the domain is not in the aligned region.

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