DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30047 and VPS70

DIOPT Version :10

Sequence 1:NP_725141.1 Gene:CG30047 / 246414 FlyBaseID:FBgn0050047 Length:879 Species:Drosophila melanogaster
Sequence 2:NP_012660.1 Gene:VPS70 / 853590 SGDID:S000003887 Length:811 Species:Saccharomyces cerevisiae


Alignment Length:323 Identity:66/323 - (20%)
Similarity:119/323 - (36%) Gaps:71/323 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 PSGA----YMHWQMVNMYQGVTNVVVKISSRSSNSSSYLLVNSHFDSKPSSPGSGDDGTMVVVML 193
            ||.:    ::|.::....:.:::|.|.|....:...  :::.:|.||..|| .:||..:...::|
Yeast   404 PSSSIDKVHLHNELTYNIKEMSSVEVSIPGIFTEGE--IIIGAHRDSLASS-SAGDANSGSAILL 465

  Fly   194 EVLRQVAISDTPFEH------PIVFLFNGAEENPLEASHGFITQHKWAGNCKALINLEVAGSGGR 252
            |:.|.::   ...:|      ||..:....|.:.|..|..:...|......:||:.|.:..:   
Yeast   466 EIARGMS---KLLKHGWKPLRPIKLISWDGERSGLLGSTDYAEAHAAILRRRALVYLNLDNA--- 524

  Fly   253 DLLFQSGPN-----NPWLIKYYYQNAKHPFATTMAEEIFQSGILPSDTDFRIFRDYGQLPGLDMA 312
                .||.|     ||.|....|:.||      :.|       .....|:.:| |:.:.......
Yeast   525 ----ISGTNFHCKANPLLQDVIYEAAK------LTE-------FNGHEDWSLF-DHWKYTSNATI 571

  Fly   313 QISNGYVYHTIFDNVQAVPIDSLQSSGDNALSLV---RAFADAPEMQNPEDHSEG--HAVFFDYL 372
            .:.:|...:|.|.....||....|.:.::....|   .:..|:|.......:|:.  |.....::
Yeast   572 SLLDGLSSYTSFQYHLGVPAAHFQFNANDTSGAVYHSNSVFDSPTWLEKFTNSDYKLHNTMAMFV 636

  Fly   373 GLFFVYYTE------NTGIVL----NCCIA--------------VASLVLVVCSLLRMGRESD 411
            ||..:..:|      ||.:.|    |..||              |.||...|..||::..:.|
Yeast   637 GLTTLMLSENELARFNTHVYLKKIYNWYIAWHSNLSSAFPQDDEVNSLAKRVLDLLKVATQED 699

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30047NP_725141.1 M28_Fxna_like 72..379 CDD:349872 52/265 (20%)
VPS70NP_012660.1 Zinc_peptidase_like 135..>187 CDD:472712
PA_GCPII_like 187..413 CDD:239036 2/8 (25%)
M28_PMSA_TfR_like 419..649 CDD:349871 50/256 (20%)
TFR_dimer <725..799 CDD:461238
Blue background indicates that the domain is not in the aligned region.

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