DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30047 and AT5G19740

DIOPT Version :10

Sequence 1:NP_725141.1 Gene:CG30047 / 246414 FlyBaseID:FBgn0050047 Length:879 Species:Drosophila melanogaster
Sequence 2:NP_197475.2 Gene:AT5G19740 / 832094 AraportID:AT5G19740 Length:681 Species:Arabidopsis thaliana


Alignment Length:212 Identity:52/212 - (24%)
Similarity:90/212 - (42%) Gaps:46/212 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 YQGVTNVVVKISS------RSSNSSSYLLVNSHFDSKPSSPGSGDDGTMVVVMLEVLRQVAISDT 204
            |.|.| |:.||.:      .......|:::.:|.|:  .:.|:.|..:...|::|:.:::.....
plant   302 YIGET-VIAKIENVIGVIEGEEEPDRYVILGNHRDA--WTFGAVDPNSGTAVLMEIAQRLDKLQK 363

  Fly   205 PFEHP--IVFLFN-GAEENPLEASHGFITQHKW--------AGNCKALINLEVAGSGGRDLLFQS 258
            ....|  .:.|.| .|||      :|.|...:|        :....|.:|::.|.||..   |.:
plant   364 RGWKPRRTIILCNWDAEE------YGLIGSTEWVEENREMLSSRAVAYLNVDCAVSGPG---FHA 419

  Fly   259 G--PNNPWLIKYYYQNAKHPFATTMAEEIFQSGILPSD-----------TDFRIFRDYGQLPGLD 310
            .  |....|||...|..:.|...|  :.|::|.|..||           :|:..|..:..:||:|
plant   420 SATPQLDELIKVAAQEVRDPDNAT--QTIYESWIGSSDSVVIRRLGGGGSDYASFVQHVGVPGVD 482

  Fly   311 MAQISNGY-VYHTIFDN 326
            |: ...|| |||:::|:
plant   483 MS-FGRGYPVYHSMYDD 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30047NP_725141.1 M28_Fxna_like 72..379 CDD:349872 52/212 (25%)
AT5G19740NP_197475.2 PA_GCPII_like 94..300 CDD:239036
M28_PSMA_like 309..535 CDD:349942 48/204 (24%)
TFR_dimer 560..677 CDD:461238
Blue background indicates that the domain is not in the aligned region.

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