DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30047 and AMP1

DIOPT Version :10

Sequence 1:NP_725141.1 Gene:CG30047 / 246414 FlyBaseID:FBgn0050047 Length:879 Species:Drosophila melanogaster
Sequence 2:NP_567007.1 Gene:AMP1 / 824637 AraportID:AT3G54720 Length:705 Species:Arabidopsis thaliana


Alignment Length:284 Identity:69/284 - (24%)
Similarity:121/284 - (42%) Gaps:67/284 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 PKVVG----SVANEVTTVAFLEEEVENIRAAMRSDLYELQLDVQHPSGAYMHWQ----------- 141
            |.|||    |:.:|:.|..|  .::.::..::|:  .|:.|.....:.|.:.|:           
plant   254 PGVVGGEKLSLDDELVTRRF--PKIPSLPLSLRN--AEIILASLGGARAPLEWRNSGRVGPGQRV 314

  Fly   142 -----MVNM-YQG------VTNVVVKISSRSSNSSSYLLVNSHFDSKPSSPGSGDDGTMVVVMLE 194
                 ::|| :||      :.||||.|.. |..:..|:::.:|.|:  .:.|:.|..:....:|:
plant   315 GPGRMVINMTFQGEMKMKKINNVVVTIRG-SEEADRYVILGNHRDA--WTYGAVDPNSGTSALLD 376

  Fly   195 VLRQVAI---SDTPFEHPIVFLFNGAEENPLEASHGFITQHKW--------AGNCKALINLE--V 246
            :.|:.|:   |.......|:.....|||      .|.|...:|        ..:..|.:|::  |
plant   377 ISRRFALLLKSGWRPRRTILLCSWDAEE------FGMIGSTEWIEENVLNLGASAVAYLNVDCAV 435

  Fly   247 AGSGGRDLLFQSG--PNNPWLIKYYYQNAKHPFATTM-AEEIF--QSGILPS----DTDFRIFRD 302
            .|||     |.:|  |....|:....:..:.|.|..: .||.|  |:.|:..    |:||..|..
plant   436 QGSG-----FFAGATPQLDGLLVDVLKLVQDPDAVGLTVEETFKSQNNIIQRLSRVDSDFSGFLH 495

  Fly   303 YGQLPGLDMAQISNGYVYHTIFDN 326
            :..:|.:||...::..||||.||:
plant   496 HAGIPSIDMYYGADYPVYHTAFDS 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30047NP_725141.1 M28_Fxna_like 72..379 CDD:349872 69/284 (24%)
AMP1NP_567007.1 PA 141..321 CDD:333703 13/70 (19%)
M28_PSMA_like <333..556 CDD:349942 52/201 (26%)
TFR_dimer 580..701 CDD:461238
Blue background indicates that the domain is not in the aligned region.

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