DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30047 and Naalad2

DIOPT Version :10

Sequence 1:NP_725141.1 Gene:CG30047 / 246414 FlyBaseID:FBgn0050047 Length:879 Species:Drosophila melanogaster
Sequence 2:NP_001100272.1 Gene:Naalad2 / 300384 RGDID:1305872 Length:778 Species:Rattus norvegicus


Alignment Length:231 Identity:54/231 - (23%)
Similarity:84/231 - (36%) Gaps:50/231 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 MHWQMVNMYQGVTNVVVKISSRSSNSSSYLLVNSHFDSKPSSPGSGDDGTMVVVMLEVLR---QV 199
            ||...:|....:.||:..|.. |:....|:::..|.||...  |..|..|...|:.|:.|   ::
  Rat   372 MHVHNINKITRIYNVIGTIRG-STEPDRYVILGGHRDSWVF--GGIDPTTGTAVLQEIARSFGKL 433

  Fly   200 AISDTPFEHPIVFLFNGAEENPLEASHGFITQHKWA-GNCK-------ALINLEVAGSGG----- 251
            ..........|:|....|||      .|.:...:|| .|.|       |.||.:.|..|.     
  Rat   434 VNGGWKPRRTIIFASWDAEE------FGLLGSTEWAEENAKILQERSIAYINSDSAIEGNYTLRV 492

  Fly   252 --RDLLFQ---------SGPNNPWLIKYYYQNAKHPFATTMAEEIFQSGILPSDTDFRIFRDYGQ 305
              ..||.|         |.|::.:..|..|::......:...:|..:...|.|.:||..   |.|
  Rat   493 DCTPLLHQLVYKVAREISSPDDGFESKSLYESWLEKDPSPENKERPRINKLGSGSDFEA---YFQ 554

  Fly   306 LPGLDMA-----------QISNGYVYHTIFDNVQAV 330
            ..|:...           :.|:..|||||::..:.|
  Rat   555 RLGIASGRARYTKNKKTDKYSSYPVYHTIYETFELV 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30047NP_725141.1 M28_Fxna_like 72..379 CDD:349872 54/231 (23%)
Naalad2NP_001100272.1 Zinc_peptidase_like 86..>143 CDD:472712
PA_GCPII_like 148..374 CDD:239036 1/1 (100%)
M28_PSMA_like <382..623 CDD:349942 51/221 (23%)
TFR_dimer 655..774 CDD:461238
Blue background indicates that the domain is not in the aligned region.

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