DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30047 and gcp-2.2

DIOPT Version :10

Sequence 1:NP_725141.1 Gene:CG30047 / 246414 FlyBaseID:FBgn0050047 Length:879 Species:Drosophila melanogaster
Sequence 2:NP_509928.3 Gene:gcp-2.2 / 183230 WormBaseID:WBGene00007954 Length:779 Species:Caenorhabditis elegans


Alignment Length:333 Identity:66/333 - (19%)
Similarity:121/333 - (36%) Gaps:95/333 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 GQFVAERAQRLLYKYDKIGPKVVGSVANEVTTVAFLEEEVENIRA-AMRSDLYELQLDVQHPSG- 135
            |....|:.::     |.:..|.:.::.....|.|..:...||::. |:.:| ::.:|:|.:..| 
 Worm   294 GDLFKEKTEQ-----DLLDEKKIPTIPMLPITYATAQILFENMKGDAVNAD-FQGKLNVTYRYGP 352

  Fly   136 ---------AYMHWQMVNMYQGVTNVVVKISSRSSNSSSYLLVNSHFDSKPSSPGSGDDGTMVVV 191
                     ..:|.:  |..:.:.|::..|.. |.....::||::|:|:  .:.|:.|..:....
 Worm   353 GLINNQKLRVTVHAE--NEERKIQNIMGYIKG-SQEPDKFVLVSNHYDA--WTYGAVDPNSGTST 412

  Fly   192 MLEVLR-----QVAISDTPFEHPIVFLFNGAEENPLEASHGFITQHK--WAGNCKALINLEVAGS 249
            :|||.|     |......| ...|:|....|||..|..|..|..:::  ......|:||:::.| 
 Worm   413 LLEVSRALKQYQNQTGWIP-ARSILFAHWDAEEYGLIGSTEFAEEYRLQLMRRAVAVINMDLIG- 475

  Fly   250 GGRDLLFQSGPNNPWLIKYYYQNAKHPFATTMAEEIFQSGILPSDTDFRIFRDYGQLPGLDMAQI 314
            |.:.||..|.|....:::....|.:.|..|.|                    :.|:         
 Worm   476 GNQTLLGLSNPTVANVLRSAAANVEQPNPTEM--------------------EQGR--------- 511

  Fly   315 SNGYVYHTIFDNVQAVPIDSLQSSGDNALSLVRAFADAPEMQNPEDH--------SEGHAVFFDY 371
                  .|::|:.:..                     ||...|...|        ...|..||||
 Worm   512 ------KTLYDSWKYY---------------------APSKNNRSTHPYQRIPAGGSDHLPFFDY 549

  Fly   372 LGLFFVYY 379
            ||:..|::
 Worm   550 LGIPIVFF 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30047NP_725141.1 M28_Fxna_like 72..379 CDD:349872 66/331 (20%)
gcp-2.2NP_509928.3 Zinc_peptidase_like 78..>133 CDD:472712
PA_GCPII_like 137..364 CDD:239036 13/75 (17%)
M28_PSMA_like 363..614 CDD:349942 53/258 (21%)
TFR_dimer 646..773 CDD:461238
Blue background indicates that the domain is not in the aligned region.

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