DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cpr49Aa and Pcp

DIOPT Version :10

Sequence 1:NP_001097285.1 Gene:Cpr49Aa / 246413 FlyBaseID:FBgn0050045 Length:144 Species:Drosophila melanogaster
Sequence 2:NP_476673.1 Gene:Pcp / 33985 FlyBaseID:FBgn0003046 Length:184 Species:Drosophila melanogaster


Alignment Length:126 Identity:47/126 - (37%)
Similarity:66/126 - (52%) Gaps:18/126 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LLLSLAQARPQVRGQAPGEPIP-------IIRQEQEVNFDGSYKYLYETGNGINAEEEGYLKNPG 68
            ||::...|...::.||....||       .::.:.:|..||.|:|.|||.|||:|.:||.     
  Fly     3 LLVNFIVALAVLQVQAGSSYIPDSDRNTRTLQNDLQVERDGKYRYAYETSNGISASQEGL----- 62

  Fly    69 TDNAGQVAQGSFSYTSPEGIPIRITYLADENGFQPQGDHLPTPPPIPPAIQKALAYLATAP 129
               .|...||..|||||||..|.:.|:|||.|:.|.|.|:   |.:|..|.::|.|:.|.|
  Fly    63 ---GGVAVQGGSSYTSPEGEVISVNYVADEFGYHPVGAHI---PQVPDYILRSLEYIRTHP 117

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cpr49AaNP_001097285.1 Chitin_bind_4 46..101 CDD:459790 26/54 (48%)
PcpNP_476673.1 Chitin_bind_4 45..92 CDD:459790 26/54 (48%)

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