DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30043 and APE3

DIOPT Version :10

Sequence 1:NP_725143.1 Gene:CG30043 / 246412 FlyBaseID:FBgn0050043 Length:878 Species:Drosophila melanogaster
Sequence 2:NP_009845.2 Gene:APE3 / 852589 SGDID:S000000490 Length:537 Species:Saccharomyces cerevisiae


Alignment Length:238 Identity:53/238 - (22%)
Similarity:97/238 - (40%) Gaps:41/238 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 NVIVKLSSKSSQSESYLLLNSHFDSKPGSPGSGDDGTMVVVMMEVLRQMSISEIPFEHPIVFLFN 214
            |:|.  .:|....::.:.|.:|.||....||..|||:..:.::.|.:|::..:|  .:.:.|.:.
Yeast   295 NIIA--DTKHGDPDNIVALGAHSDSVEEGPGINDDGSGTISLLNVAKQLTHFKI--NNKVRFAWW 355

  Fly   215 GAEENPLQASHGF---ITQHKWAEKCKAFINLEVGGSGGRDLLFQSGPN--NP--------WLMK 266
            .|||..|..|:.:   :|:.: ..|.:.|::.::..|...:.......|  ||        ..:.
Yeast   356 AAEEEGLLGSNFYAYNLTKEE-NSKIRVFMDYDMMASPNYEYEIYDANNKENPKGSEELKNLYVD 419

  Fly   267 YYRQHAKHPFATTMAEEIFQSGVLPSD--SDFRIFRD----YGNIA-GLDIAQIENGYV----YH 320
            ||:.|  |...|          ::|.|  ||:..|.:    .|.|| |.:...:.||.|    ||
Yeast   420 YYKAH--HLNYT----------LVPFDGRSDYVGFINNGIPAGGIATGAEKNNVNNGKVLDRCYH 472

  Fly   321 TAFDTYENVPGRSIQNSGNNVLALVRAYSNASELYNTESDDSH 363
            ...|...|:...:...:...:...|..|:::.|.:.......|
Yeast   473 QLCDDVSNLSWDAFITNTKLIAHSVATYADSFEGFPKRETQKH 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30043NP_725143.1 M28_Fxna_like 71..377 CDD:349872 53/238 (22%)
YfcC <534..>615 CDD:440899
APE3NP_009845.2 M28_SGAP_like 78..506 CDD:349873 51/227 (22%)
PA_ScAPY_like 155..284 CDD:239045
Blue background indicates that the domain is not in the aligned region.

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