back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG30043 and AMP1

DIOPT Version :10

Sequence 1:	NP_725143.1	Gene:	CG30043 / 246412	FlyBaseID:	FBgn0050043	Length:	878	Species:	Drosophila melanogaster
Sequence 2:	NP_567007.1	Gene:	AMP1 / 824637	AraportID:	AT3G54720	Length:	705	Species:	Arabidopsis thaliana

Alignment Length:	216	Identity:	56/216 - (25%)
Similarity:	100/216 - (46%)	Gaps:	43/216 - (19%)

- Green bases have known domain annotations that are detailed below.

  Fly   141 MVNM-YQG------IHNVIVKLSSKSSQSESYLLLNSHFDSKPGSPGSGDDGTMVVVMMEVLRQM 198
            ::|| :||      |:||:|.:.. |.:::.|::|.:|.|:  .:.|:.|..:....::::.|:.
plant   320 VINMTFQGEMKMKKINNVVVTIRG-SEEADRYVILGNHRDA--WTYGAVDPNSGTSALLDISRRF 381

  Fly   199 SI---SEIPFEHPIVFLFNGAEENPLQASHGFITQHKWAEK--------CKAFINLE--VGGSGG 250
            ::   |.......|:.....|||      .|.|...:|.|:        ..|::|::  |.|||
plant   382 ALLLKSGWRPRRTILLCSWDAEE------FGMIGSTEWIEENVLNLGASAVAYLNVDCAVQGSG- 439

  Fly   251 RDLLFQSG--PNNPWLMKYYRQHAKHPFATTM-AEEIF--QSGVLPS----DSDFRIFRDYGNIA 306
                |.:|  |....|:....:..:.|.|..: .||.|  |:.::..    ||||..|..:..|.
plant   440 ----FFAGATPQLDGLLVDVLKLVQDPDAVGLTVEETFKSQNNIIQRLSRVDSDFSGFLHHAGIP 500

  Fly   307 GLDIAQIENGYVYHTAFDTYE 327
            .:|:....:..|||||||:|:
plant   501 SIDMYYGADYPVYHTAFDSYD 521

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.