DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30043 and CG11961

DIOPT Version :10

Sequence 1:NP_725143.1 Gene:CG30043 / 246412 FlyBaseID:FBgn0050043 Length:878 Species:Drosophila melanogaster
Sequence 2:NP_725876.1 Gene:CG11961 / 37221 FlyBaseID:FBgn0034436 Length:891 Species:Drosophila melanogaster


Alignment Length:864 Identity:358/864 - (41%)
Similarity:539/864 - (62%) Gaps:23/864 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 KGYVRRPRLSWYYAPSFLLLWLALFYAIVIPLYYRLPDRLTISEESHRPGEFVAERAQQYLYTYD 87
            :.:|:..::.|::||:|...||.|:..|.||..:|||..|||.:|...|.:|:||||::.|....
  Fly    43 RAFVQGNKIKWFWAPAFFGFWLLLYVTISIPACHRLPRPLTIQDEETHPDQFIAERAEKNLRELV 107

  Fly    88 RIGPKVTGSYANEVTTVEFLVNETEKIRAEMRSDLYDLELDVQSPTGGYVFNDMVNMYQGIHNVI 152
            .:||:|.||..||:..::.|..:.:|||:...:   |:|:|||..:|.||...||||||.|.|::
  Fly   108 SLGPRVVGSRQNEMAALKMLSQKMQKIRSGTAN---DIEVDVQVASGSYVHWSMVNMYQSIQNIV 169

  Fly   153 VKLSSKSSQSESYLLLNSHFDSKPGSPGSGDDGTMVVVMMEVLRQMSISEIPFEHPIVFLFNGAE 217
            ||:|.|::.|.:|||:|||:||.|..||:||||:||..||||||.::.|:.|.::|:||||||||
  Fly   170 VKISPKNTNSTTYLLVNSHYDSVPAGPGAGDDGSMVATMMEVLRVLAKSDKPLKNPVVFLFNGAE 234

  Fly   218 ENPLQASHGFITQHKWAEKCKAFINLEVGGSGGRDLLFQSGPNNPWLMKYYRQHAKHPFATTMAE 282
            ||||||||.||||||||:.|||.|||:..|:|||::|||||||:|||||.||:..|||:|:||.|
  Fly   235 ENPLQASHAFITQHKWAKYCKALINLDSCGNGGREILFQSGPNHPWLMKNYRRAIKHPYASTMGE 299

  Fly   283 EIFQSGVLPSDSDFRIFRDYGNIAGLDIAQIENGYVYHTAFDTYENVPGRSIQNSGNNVLALVRA 347
            |:||...:|||:|||||||:|::.|||:|...||:||||..|..|..|..|.|::|:|:|||||.
  Fly   300 ELFQHNFIPSDTDFRIFRDHGSVPGLDMAYTYNGFVYHTRHDKAEIFPRGSFQHTGDNLLALVRQ 364

  Fly   348 YSNASELYNT-ESDDSHAVFFDFLGLFFVYYTETTGIVVNCVIGVLSLVLVGCSVWRMCHQSE-- 409
            .:|:.|:.|: :....|.::||.:|.|.|:||||.|:::|.::.::|:.:.|.:...|...|.  
  Fly   365 IANSPEIENSAKYAKGHTIYFDVMGWFLVFYTETEGVILNVIVSLVSIGICGYAFKLMSVNSGIK 429

  Fly   410 -EASLPQIS----IWFLSILGLHVVGFLLCICLPLLMAVLFDAGDRSLTYFTSNWLVFGLYVCPA 469
             |..|.::.    :..||:    |||.:    ||:|:.:..||....|::|:::||:.|||....
  Fly   430 LEKILKKVGHTLLVQILSV----VVGAI----LPVLLGLFMDAVHLPLSWFSNSWLILGLYFTTF 486

  Fly   470 IIGLVLPLTLYYTLLPNEKLSQAYQLQLSLHAHLVVQALLALILTAMGLRSQYLCLISMIFYGGA 534
            ..||.:...||:.....:||....::||.||.|.::.::|.||.|..|:||.::.::|.:||...
  Fly   487 FFGLAIVPALYFHWTKRDKLPIGQRVQLLLHCHCLLLSVLTLIFTICGIRSVFVLMLSCLFYTVG 551

  Fly   535 LLINLVSTLHDRGYYWVPIVMFLQVLPFSYFCYLFYMFLVIFIPVLGRNGYSTNPDLIVGLLCGV 599
            |:||:.:.||.:...||...:...|.||.:|.|..:.|...|||:.||.|.:.||||.|.:....
  Fly   552 LIINIATKLHTKDVAWVIPHIVCTVPPFVFFAYFSHGFFTTFIPMFGRFGENLNPDLAVAVFSVA 616

  Fly   600 CVFFALGFAAQLINMFRWPKLILLGLGVMTFIFCMIAVSDVGFPYRAKTNVMRANCLHTRRIFYE 664
            ..|...||...::.:|...|.|:.||..:|.:..:||::.:|||||.:|||.|...|||:|.|::
  Fly   617 VGFLCCGFIIPVLQLFNKSKTIICGLMGITLLCFIIAMTPIGFPYRPETNVQRFAVLHTKRTFHD 681

  Fly   665 HDGSVSRSDSGYYFNYQDRRAFAPLEDSALDLTGLEPVANRCDDYVMCGIPCFYYSWCKWRQWDG 729
            ....|.|.:|||:...||||.:. ::::.:::|..:.:.:.||..:.||:|.:...|.|.|:...
  Fly   682 AQNKVRRQESGYFIMPQDRRTYT-VKNAVINMTLAQRIGSDCDKEINCGLPLYNQRWHKTRKNSL 745

  Fly   730 WLPRESEVILPGELTLDFLGYTVLESGTVARYEFELAGPPHMNLFIQPVGSAKVDDWSFVRKMLD 794
            |:|....|:.....|:..|....: |.|..|||.:|:||.||.|||||:..||:.||||.:..| 
  Fly   746 WIPASEPVLGENVPTVLLLSKNTV-SPTKIRYEMQLSGPNHMALFIQPLNGAKMMDWSFHQAPL- 808

  Fly   795 EPEEFQPPYQIFHSYGTDNTSLKFFIDMEKPDGIFDTPTLELAAVGHWVSFEYERDAEAKDFVAA 859
             ...|:|||.|:.|:|.:...|||::::|||:|.:::.||||...|||...:.....:.|.|:.:
  Fly   809 -RLSFEPPYFIYFSWGVNGDPLKFWLELEKPNGNWNSSTLELGLGGHWNHHKELITPDFKKFLDS 872

  Fly   860 FPDFVHVMEWPSIFKRYIF 878
            ||.:|....||:.|:..||
  Fly   873 FPHYVDATPWPASFESRIF 891

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30043NP_725143.1 M28_Fxna_like 71..377 CDD:349872 165/306 (54%)
YfcC <534..>615 CDD:440899 27/80 (34%)
CG11961NP_725876.1 M28_Fxna_like 91..395 CDD:349872 165/306 (54%)
MFS <539..>658 CDD:475125 38/118 (32%)

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