DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30043 and Tfr2

DIOPT Version :10

Sequence 1:NP_725143.1 Gene:CG30043 / 246412 FlyBaseID:FBgn0050043 Length:878 Species:Drosophila melanogaster
Sequence 2:XP_006249178.1 Gene:Tfr2 / 288562 RGDID:1310152 Length:838 Species:Rattus norvegicus


Alignment Length:379 Identity:70/379 - (18%)
Similarity:141/379 - (37%) Gaps:95/379 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 DTELVESLSL-RKG---YVRRPRLSWYYAPSFLLLWLALFYAIVIPLYYRLPDRLTISEESHRPG 72
            |.||..||.| |.|   :.::..::..:....:|::               ||....|::.|:||
  Rat   298 DVELAGSLLLVRAGITSFAQKVAIAQDFGAHGVLIY---------------PDPADFSQDPHKPG 347

  Fly    73 EFVAERAQQYLYTYDRIG-----------------PKVTGSYANEVTTVEFLVNETEKIRAEMRS 120
             ..::||   :|.:..:|                 |.|..|....:.......:..:::..::..
  Rat   348 -LSSDRA---VYGHVHLGTGDPYTPGFPSFNQTQFPPVESSGLPNIPAQPISADVADRLLRKLTG 408

  Fly   121 DLYDLELDVQSPTGGYVFND------MVNMYQ---GIHNVIVKLSSKSSQSESYLLLNSHFDSKP 176
            .:...|...:.....|....      :||.::   .|.|:...:.. .::.:.|:::.:..|:  
  Rat   409 PVAPQEWKGRLSDSPYRLGPGPGLRLVVNNHRTSTPISNIFACIEG-FAEPDHYVVIGAQRDA-- 470

  Fly   177 GSPGSGDDGTMVVVMMEVLR---QMSISEIPFEHPIVFL-FNGAEENPLQASHGFITQHKWAE-- 235
            ..||:........:::|::|   .|..|.......::|: ::|.:       .|.:...:|.|  
  Rat   471 WGPGAAKSAVGTAILLELVRTFSSMVSSGFRPRRSLLFISWDGGD-------FGSVGATEWLEGY 528

  Fly   236 ------KCKAFINLE--VGGSGG-------------RDLLFQ-SGPNNPWLMKYYRQHAKHPFAT 278
                  |...:::|:  |.|.|.             .::|.| ..||:.....|.:....||   
  Rat   529 LSVLHLKAVVYVSLDNSVLGDGKFHAKTSPLLVSLIENILKQVDSPNHSGQTLYDQVAFTHP--- 590

  Fly   279 TMAEEIFQSGVLPSDSDFRIFRDYGNIAGLDIAQIENGYVY---HTAFDTYENV 329
            :...|:.|.  ||.||....|..:..:..::.:.:|:..||   ||..|||||:
  Rat   591 SWDAEVIQP--LPMDSSAYSFTAFAGVPAVEFSFMEDDRVYPFLHTKEDTYENL 642

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30043NP_725143.1 M28_Fxna_like 71..377 CDD:349872 57/316 (18%)
YfcC <534..>615 CDD:440899
Tfr2XP_006249178.1 Zinc_peptidase_like 179..>232 CDD:472712
PA_TfR 246..436 CDD:239043 24/156 (15%)
M28_TfR 444..677 CDD:349946 44/214 (21%)
TFR_dimer 704..828 CDD:461238
Blue background indicates that the domain is not in the aligned region.

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