DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30043 and erm2

DIOPT Version :10

Sequence 1:NP_725143.1 Gene:CG30043 / 246412 FlyBaseID:FBgn0050043 Length:878 Species:Drosophila melanogaster
Sequence 2:NP_588494.1 Gene:erm2 / 2539157 PomBaseID:SPCC1919.12C Length:843 Species:Schizosaccharomyces pombe


Alignment Length:872 Identity:182/872 - (20%)
Similarity:318/872 - (36%) Gaps:265/872 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 YLYTYDRI----GPKVTGSYA-----NEVTTVEFLVN-----ETEKIRAEMRSDLYDLELDVQSP 132
            ||..:.||    ||.:.....     |::..:..|.:     :.|.:|:.:...:.:||...|| 
pombe    35 YLLDWKRIAQVPGPNLLKDLEFQRAWNDLEYISSLPHPYNSKQNEHVRSYILKSMRELEATNQS- 98

  Fly   133 TGGYVF---------------NDMVNMYQGIHNVIVKLSSKSSQSESYLLLNSHFDSKPGSPGSG 182
               |:.               ||.:..::| .|::||...||..... :||::||||.....|:.
pombe    99 ---YITVIDDTLTNITFESTDNDTLTYFEG-DNILVKFEGKSKDLFP-ILLSAHFDSVSTGYGAT 158

  Fly   183 DDGTMVVVMMEVLRQMSISEIPFEHPIVFLFNGAEENPLQASHGFITQHKWAEKCKAFINLEVGG 247
            |||..|..:|.:.|..:.:: | ...::...|.|||:.|..:..| ..||.::...||:|||..|
pombe   159 DDGMGVATVMAIARYYAKNQ-P-NRDLIININNAEEDYLFGAKAF-ASHKLSKNVTAFVNLEGAG 220

  Fly   248 SGGRDLLFQSGPNNPWLMKYYRQHAKHPFATTMAEEIFQSGVLPSDSDFRIF-RDYGNIAGLDIA 311
            |||:.:||:|  :|..:...|.:...:|.|:.:..:.|:.||:.|.:|:.:: :.:.:.||||||
pombe   221 SGGKAMLFRS--SNGHVSSAYFKGNHYPLASILGNDFFKRGVIRSQTDYIVYEKMHNHTAGLDIA 283

  Fly   312 QIENGYVYHTAFDTYENVPGRSIQNSGNNVLALVRAYSNA-SELYNTESDD----SHAVFFDFLG 371
            ..||..:|||..|...::...|:::       ::...||| ..|.|....|    ...:||...|
pombe   284 FYENRDIYHTRKDDINHLMPSSLRH-------MMYTASNAVKNLLNDSKSDLTKFRKPMFFLAFG 341

  Fly   372 LFF-----VYYTETTGIVVNCVIGVLSLVLVGCSVWRMCHQSEEASLPQISIWFLSILGLHVVGF 431
            .::     :|.      |:|.:..|:..:::..::.|.....|:...|:               :
pombe   342 KYWQLNLPIYQ------VLNIIFAVICPIVLLLTLIRFPSLYEQLKKPR---------------Y 385

  Fly   432 LLCICLPLLMAVLFDAGDRSLTYFTSNWLVFGLYVCPAIIGLVLPLTLYYTLLPNEKLSQAYQLQ 496
            .:|..:..:...:||    :||.....|:  ..||..:..||:  |.|:|       |:....|.
pombe   386 TVCFVVSCIFVSIFD----TLTVLLLTWI--NPYVINSHTGLI--LALFY-------LTNLIALA 435

  Fly   497 LSLHAHLVVQALLALILTAMGLRSQYLCLISMIFYGGALLINLVSTLHDRGYYWVPIVMFLQVLP 561
            .|..|          ..|...|.|:.|..|.::|                       :.:.|:| 
pombe   436 FSFRA----------AATHSKLSSEDLSSIEIVF-----------------------IWYAQIL- 466

  Fly   562 FSYFCYLFYMFLVIFIPVLGRNGYSTNPDLIVGLLCGVCVFFALGFAAQLINMFRWPKLILLGLG 626
                     .:||..:.|:                  :.::|.||..       .|..|..|   
pombe   467 ---------WYLVFIVSVI------------------LSIYFQLGST-------YWVTLSYL--- 494

  Fly   627 VMTFIFCMIAVSDVGFPYRAKTNVMRANCLHTRRIFYEHDGSVSRS-DSGYYFNYQDRRAFAPLE 690
             .||..|::.:..:.:   ...||:.....|      |.|..:..| ::..:.:|.......|..
pombe   495 -CTFTCCIMTIIRINY---FVDNVVTTQTTH------EEDALIGSSINTSSHQHYGSTLNSTPHR 549

  Fly   691 DSALDLTGLEPVANRCDDYVMCGI-PCFYYSWCKWRQWDGWLPRESEVILPGELTLDFLGYTVLE 754
            .:::.|      :||....::..| ...|:.:              .|..|..|..|.|..|:|.
pombe   550 RNSIAL------SNRAHVKLIDNIWTVIYFIF--------------NVPFPVFLCYDILVETILP 594

  Fly   755 SG----TVARYEFEL--------------AGP----------------PHMNLFIQ-----PVGS 780
            :|    |.:.:..:|              :||                ..:.||:|     |...
pombe   595 AGSQTLTDSVFSSKLYKLVIFVVFLSLVNSGPFIFRALSKKSLAVLTMLWITLFVQALSVNPFTE 659

  Fly   781 AKVDDWSFVRKMLDEP--------EEFQP---------PYQIFHSYGTDNTSLKFFIDMEKPDGI 828
            :.....||| :|.|..        :...|         |:.:| |.|:.||||.::...:...|.
pombe   660 SAPLKLSFV-QMYDMDRMNNTVYVKNISPFTQDVLSLNPHFLF-SNGSCNTSLCYYESTDPDFGG 722

  Fly   829 FDTPTLELAAVGHWVSFEYERDAEAKD 855
            ..||          :|...||:....|
pombe   723 LKTP----------MSIHIEREKHQLD 739

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30043NP_725143.1 M28_Fxna_like 71..377 CDD:349872 88/334 (26%)
YfcC <534..>615 CDD:440899 8/80 (10%)
erm2NP_588494.1 M28_Fxna_like 57..344 CDD:349872 82/304 (27%)

Return to query results.
Submit another query.