DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30043 and gcp-2.2

DIOPT Version :10

Sequence 1:NP_725143.1 Gene:CG30043 / 246412 FlyBaseID:FBgn0050043 Length:878 Species:Drosophila melanogaster
Sequence 2:NP_509928.3 Gene:gcp-2.2 / 183230 WormBaseID:WBGene00007954 Length:779 Species:Caenorhabditis elegans


Alignment Length:369 Identity:82/369 - (22%)
Similarity:142/369 - (38%) Gaps:104/369 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 GEFVAERAQQYLYTYDRIG--PKVTGSYANEVTTVEFLVNETEKIRAEMRSDLYDLELDVQSPTG 134
            |:...|:.:|.|....:|.  |.:..:||    |.:.|.   |.::.:..:..:..:|:|....|
 Worm   294 GDLFKEKTEQDLLDEKKIPTIPMLPITYA----TAQILF---ENMKGDAVNADFQGKLNVTYRYG 351

  Fly   135 -GYVFNDMV-------NMYQGIHNVIVKLSSKSSQSESYLLLNSHFDSKPGSPGSGDDGTMVVVM 191
             |.:.|..:       |..:.|.|::..:.. |.:.:.::|:::|:|:  .:.|:.|..:....:
 Worm   352 PGLINNQKLRVTVHAENEERKIQNIMGYIKG-SQEPDKFVLVSNHYDA--WTYGAVDPNSGTSTL 413

  Fly   192 MEVLR-----QMSISEIPFEHPIVFLFNGAEENPLQASHGFITQHKWAEKCK--------AFINL 243
            :||.|     |.....|| ...|:|....|||      :|.|...::||:.:        |.||:
 Worm   414 LEVSRALKQYQNQTGWIP-ARSILFAHWDAEE------YGLIGSTEFAEEYRLQLMRRAVAVINM 471

  Fly   244 EVGGSGGRDLLFQSGPN---------------NPWLM-----------KYY----RQHAKHPFAT 278
            ::.| |.:.||..|.|.               ||..|           |||    ...:.||:..
 Worm   472 DLIG-GNQTLLGLSNPTVANVLRSAAANVEQPNPTEMEQGRKTLYDSWKYYAPSKNNRSTHPYQR 535

  Fly   279 TMAEEIFQSGVLPSDSDFRIFRDYGNI-------AGLDIAQIENGY-VYHTAFDT---YENV--P 330
            ..|          ..||...|.||..|       :.||....   | :|||.::|   .||:  |
 Worm   536 IPA----------GGSDHLPFFDYLGIPIVFFITSSLDAPPT---YPLYHTIYETPYLIENIMDP 587

  Fly   331 GRSIQNS-GNNVLALVRAYSNASEL---YNTESDDSHAVFFDFL 370
            |..:..: ....:..:..::.:..|   .|...|||   .|::|
 Worm   588 GYKVHKAIAGMFIECILKFTESKILPYDLNELMDDS---IFEYL 628

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30043NP_725143.1 M28_Fxna_like 71..377 CDD:349872 82/369 (22%)
YfcC <534..>615 CDD:440899
gcp-2.2NP_509928.3 Zinc_peptidase_like 78..>133 CDD:472712
PA_GCPII_like 137..364 CDD:239036 16/76 (21%)
M28_PSMA_like 363..614 CDD:349942 60/274 (22%)
TFR_dimer 646..773 CDD:461238
Blue background indicates that the domain is not in the aligned region.

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