DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30043 and ermp1

DIOPT Version :9

Sequence 1:NP_725143.1 Gene:CG30043 / 246412 FlyBaseID:FBgn0050043 Length:878 Species:Drosophila melanogaster
Sequence 2:XP_004910853.1 Gene:ermp1 / 100145630 XenbaseID:XB-GENE-984733 Length:876 Species:Xenopus tropicalis


Alignment Length:875 Identity:266/875 - (30%)
Similarity:436/875 - (49%) Gaps:89/875 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 LALFYAIVIPLYYRLPDRLTISEESHRPGEFVAERAQQYLYTYDRIGPKVTGSYANEVTTVEFLV 108
            |.|.|.:.:.....:..|..::...|..| |.|..|::||.....|..::.||..||:..|::|:
 Frog    51 LLLLYVLGVRGLVHISLRQLVTPGGHSTG-FNASTAREYLQQITSIDSRIVGSPENEIIAVDYLL 114

  Fly   109 NETEKIRAEMRSDLYDLELDVQSPTGGY---VFNDMVNMYQGIHNVIVKLSSKSSQSESYLLLNS 170
            .:.:.|..::.| ::.:.:|||.|||.:   ......:.|..|.|:.|||..:.. :|..:|.|.
 Frog   115 GKIKDIEEKVNS-VHKITVDVQRPTGTFSIDFLGGFTSYYDNITNIAVKLEPEFG-AEHAVLANC 177

  Fly   171 HFDSKPGSPGSGDDGTMVVVMMEVLRQMSISEIPFEHPIVFLFNGAEENPLQASHGFITQHKWAE 235
            ||||...:||:.||.....||:|:|..:|:|..|..|.|:|||||||||.||.||||||||.||:
 Frog   178 HFDSVANTPGASDDAVSCAVMLEILGSLSVSSKPLRHAIIFLFNGAEENILQGSHGFITQHPWAK 242

  Fly   236 KCKAFINLEVGGSGGRDLLFQSGPNNPWLMKYYRQHAKHPFATTMAEEIFQSGVLPSDSDFRIFR 300
            ..:||||||..|.||::|:||:||.||||::.|...|.||||:.:|:|:||||::|||:||||:|
 Frog   243 MVRAFINLEAAGVGGKELVFQTGPENPWLVQAYALAAVHPFASVVAQEVFQSGIIPSDTDFRIYR 307

  Fly   301 DYGNIAGLDIAQIENGYVYHTAFDTYENVPGRSIQNSGNNVLALVRAYSNASELYNTESD---DS 362
            |:|||.|:|:|.|||||:|||.:||:..:...|||.:|:|:|.::...:.:|:|  .||.   ..
 Frog   308 DFGNIPGIDLAFIENGYIYHTKYDTWNRILTESIQRAGDNILGVLHYLATSSQL--AESSKFRHG 370

  Fly   363 HAVFFDFLGLFFVYYTETTGIVVNCVIGVLSLVLVGCSVWRMCHQSEEASLPQISIWFLSILGLH 427
            :.||||..|||.:.|....|.::|.:...::|..:|..:.:. .|........:...||    :.
 Frog   371 NMVFFDVCGLFVLSYPARLGTIINYITAAVTLFYIGKKIIKY-KQGGTNYARDLVYGFL----IT 430

  Fly   428 VVGFLLCICLPLLMAVLFDAGDRSLTYFTSNWLVFGLYVCPAIIGLVLPLTLYYTLLPNEKLSQA 492
            :|.::..:...|::|||.....::|.::|..::...||...|:..|:|..:|..|.......|| 
 Frog   431 LVSWVSALVTVLIIAVLVSLAGKALFWYTHFYVSVFLYGSAAVAKLILVHSLAKTFFFAGASSQ- 494

  Fly   493 YQLQLSLHAHLVVQALLALILTAMGLRSQYLCLISMIFYGGALLINLV---STLHDRGYYWVPIV 554
            |...:.....|::..:..::||..||.|.|.....:||   .||..|:   ..:|....|...::
 Frog   495 YLGDVFFDISLIIWCIPLVLLTQSGLCSAYFFAAWIIF---PLLTKLLLQPDIIHQGSPYKFTVI 556

  Fly   555 MFLQVLPFSYFCYLFYMFLV--IFIPVLGRNGYSTNPDLIVGLLCGVCVFFALGFAAQLINMFRW 617
            ..|.:.| .|...:::::.|  :|.|:|||:|....||:::|.|...|....:.:....|.:.:.
 Frog   557 YLLGLFP-PYLHTMYHVWAVFEMFTPILGRSGTEIPPDVVLGFLIIACTIMLISYFISFIYLVKN 620

  Fly   618 PKLILLGLGVMTFIFCMIAVSDVGFPYRAKTNVMRANCL---HTRRIFYEHDGSVSRSDSGYYFN 679
            .|.|::.|.|::.:..::..|.:.|||.:.|:..:...:   ||.|.|:...|.|.:.|||.:.|
 Frog   621 TKNIIVPLAVLSVLTFLLVCSGMFFPYSSSTDSPKPKRIFLQHTTRTFHSLTGEVVKKDSGIWIN 685

  Fly   680 YQDRRAFAPLEDSALDLTGL-----------EPVANRCDDYVMCGIPCFY--YSWCKWRQWDGWL 731
                         ..|.||:           :.|...|||..:||.|.::  ::..: :.|  :|
 Frog   686 -------------GFDYTGISHVTPHFPELNDTVRAPCDDAPLCGFPWYFPVHNLIR-KNW--YL 734

  Fly   732 PRESEVILPGELTLDFLGYTVLESGTVARYE---------FELAGPPHMNLFIQPVGSAKVDDWS 787
            |.....|           |...|...|:|.|         ||..||.||.::::|...:.:..||
 Frog   735 PAPPAPI-----------YEHTEFKLVSREEMSWGTTRLHFEAKGPSHMTVYVRPHADSVLSSWS 788

  Fly   788 F---VRKMLDEPEEFQPPYQIFHSYGTDNTSLKFFIDMEKPDGIFDTPTLELAAVG-HWVSFEYE 848
            .   :.....|.:     |.||:|:|....:.||:|:::  :...::..:...||| |:...:..
 Frog   789 LGDGIPIASGEKD-----YFIFYSHGLYAPAWKFWIEVK--NSADESKGIVTVAVGSHYFFGDSR 846

  Fly   849 RDAEAKDFVAAFPDFVHVMEWPSIFKRYIF 878
            .....|.....|||:.....|...:..|::
 Frog   847 NSPHLKTVELKFPDWSFPSSWVCTYDLYVY 876

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30043NP_725143.1 M28_Fxna_like 71..377 CDD:193497 140/311 (45%)
PMT_2 493..>634 CDD:304453 35/145 (24%)
ermp1XP_004910853.1 M28_Fxna_like 78..385 CDD:349872 140/311 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 234 1.000 Domainoid score I2323
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H121891
Inparanoid 1 1.050 401 1.000 Inparanoid score I1875
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D152011at33208
OrthoFinder 1 1.000 - - FOG0000591
OrthoInspector 1 1.000 - - otm47728
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X435
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.060

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