DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30036 and LOC448276

DIOPT Version :9

Sequence 1:NP_725096.2 Gene:CG30036 / 246408 FlyBaseID:FBgn0050036 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_001006126.1 Gene:LOC448276 / 448276 -ID:- Length:388 Species:Xenopus tropicalis


Alignment Length:314 Identity:88/314 - (28%)
Similarity:141/314 - (44%) Gaps:68/314 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 DFC-KSKALLVIAVCSGLDHFEQRSAIRQTWGNTKSFNYGEFVRLHGHLEGKYLSVMPGRLKLYS 115
            |.| ||...|::.:.........|.|||||||....|        ||.|..|             
 Frog   123 DKCQKSTPFLILLIAVEPQQLSAREAIRQTWGKEDLF--------HGILIVK------------- 166

  Fly   116 MYLSGLDDSLTAKIRIVFILGRSKNDSKRELDKLFRESIQHNDIIQENFVDSYHNLTLKSVMALK 180
                            :|:|||....:.|....:..||.|::||||::::|:|:|||:|::|.:.
 Frog   167 ----------------LFLLGRDSKGTDRTDQAIVDESNQYHDIIQQDYLDTYNNLTIKTLMGMH 215

  Fly   181 HISQSCADRAAFFLKCDDDTFVNVPNLLHFLLGGTIPLYKDTVGYHSRTTYKVKSPWNRLNGSRG 245
            .|:..|.: .::.:|.|.|.|||..:|::.||.   |.......|.:....|..:| ||...|: 
 Frog   216 WIATFCPN-VSYIMKTDSDMFVNTEHLIYRLLK---PDAAPQTNYFTGYFMKGYAP-NRNKNSK- 274

  Fly   246 LMYGHKFCNMKTVDDVKSPWYMPYYMFKGAKYPKYLSGTGYLMSIDVVKRLYAEALTTSLVHLED 310
                               ||||..::.|..||.:.|||||:.|.|:.:::|..:|:...:||||
 Frog   275 -------------------WYMPPELYPGDLYPPFCSGTGYVFSGDLAEKIYKVSLSIPRLHLED 320

  Fly   311 VFVTGICAKKAGIRRRHQPLFNYVHGKPL----CIFKGTITMHPVPLHSMLDAW 360
            |:: |:|.:|.||:....|..:|.:...:    |::...:|.|......:|..|
 Frog   321 VYI-GVCLEKLGIKPVPPPKESYFNIWRVYYSDCVYNQIVTSHQFQPSELLKYW 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30036NP_725096.2 Galactosyl_T 72..329 CDD:304462 76/256 (30%)
LOC448276NP_001006126.1 Galactosyl_T 144..338 CDD:250845 76/256 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 143 1.000 Inparanoid score I4358
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1037602at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X41
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.970

Return to query results.
Submit another query.