DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30036 and C47F8.5

DIOPT Version :9

Sequence 1:NP_725096.2 Gene:CG30036 / 246408 FlyBaseID:FBgn0050036 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_493116.2 Gene:C47F8.5 / 183561 WormBaseID:WBGene00008161 Length:368 Species:Caenorhabditis elegans


Alignment Length:407 Identity:91/407 - (22%)
Similarity:145/407 - (35%) Gaps:112/407 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 FVLLLMYLSPRPVPDVH---------DRKAELSGWE----REKPLKIG-----DYLDQGKNTA-L 47
            |:||..|.:.:.....|         :.....|||.    .|:.:..|     .:.|..|... |
 Worm    25 FLLLWNYRNVQNSSQYHANSKGKFVFEENCTRSGWNLNTTAERTMDYGTSFIISFADIQKTYKWL 89

  Fly    48 IVPR-DFCKSKALLVIAVCSGLDHFEQRSAIRQTWGNTKSFNYGEFVRLHGHLEGKYLSVMPGRL 111
            .:|. |.......:::.|.|..|.|.:|:.:|:||.|.   ||.|.||             .||:
 Worm    90 YLPETDIVLRSPDILMMVASRTDSFARRNVLRKTWMNK---NYSEIVR-------------DGRM 138

  Fly   112 KLYSMYLSGLDDSLTAKIRIVFILGRSKNDSK-RELDKLFRESIQHNDIIQENFVDSYHNLTLKS 175
            |                  .:|::|....|.: |.:  :..|:..:.|::..:..|:|.:|..||
 Worm   139 K------------------ALFLVGMVSEDYRVRRI--VMEEAKLYGDMVVIDLEDTYDDLPFKS 183

  Fly   176 VMALKHISQSCADRAAFFLKCDDDTFVNVPNLLHFLLGGTIPLYKDTVGYHSRTTYKVKSPWNRL 240
            :..|.: :.|.|.......|.|:|... .|:.|..||.|.: :..|...::.:.           
 Worm   184 LSLLLY-AVSKAPEFKVIGKIDEDVMF-FPDKLIPLLDGKV-IDPDAAAFYGQL----------- 234

  Fly   241 NGSRGLMYGHKFCNMKTVDDVKSPWYMPYYMFKGAKYPKYLSGTGYLMSIDVVKRLYAEALTTSL 305
                 |..|......|     .:.||:|.|.:....||.|::|..||.:....|.:.......:.
 Worm   235 -----LKEGEPVIKKK-----DAHWYVPDYAYNCTGYPAYVAGPFYLATRKAAKLVLKFTKFQNF 289

  Fly   306 VHLEDVFVTGICAKKAGIRR-------RHQPLFNYVHGKPLCIFKGTITMHPVPLHSMLDAW-AF 362
            :.:||..:|||.|...||.|       ||........||.:.                  || :|
 Worm   290 MTVEDSLITGILANDLGIPRKNLEHVYRHDYDIQDNEGKEIL------------------AWHSF 336

  Fly   363 VSNYSIKCLPPRKHFVK 379
            .:|     :|.|..|||
 Worm   337 KNN-----IPYRNFFVK 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30036NP_725096.2 Galactosyl_T 72..329 CDD:304462 61/264 (23%)
C47F8.5NP_493116.2 Galactosyl_T 115..313 CDD:250845 59/257 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 81 1.000 Domainoid score I5462
eggNOG 1 0.900 - - E1_KOG2287
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1037602at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm4776
orthoMCL 1 0.900 - - OOG6_100261
Panther 1 1.100 - - O PTHR11214
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X41
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.820

Return to query results.
Submit another query.