DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30031 and Tpsab1

DIOPT Version :9

Sequence 1:NP_725035.1 Gene:CG30031 / 246404 FlyBaseID:FBgn0050031 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_062195.2 Gene:Tpsab1 / 54271 RGDID:3066 Length:310 Species:Rattus norvegicus


Alignment Length:268 Identity:86/268 - (32%)
Similarity:129/268 - (48%) Gaps:22/268 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLKFVILLSAVACALGGTVPEGLLPQLDGRIVGGSATTISSFPWQISLQRSGS---HSCGGSIYS 62
            |||.::|...:..:|....|...:|: :| ||||...:.:.:|||:||:.:.:   |.||||:..
  Rat    38 MLKLLLLTLPLLSSLVHAAPSLAMPR-EG-IVGGQEASGNKWPWQVSLRVNDTYWMHFCGGSLIH 100

  Fly    63 SNVIVTAAHCL--QSVSASVLQIRAGSSYWSSGGVTFSVSSFKNHEGYNANTMVNDIAIIKINGA 125
            ...::|||||:  .....:.|:::....|........:||...:|..:.......|||::|:...
  Rat   101 PQWVLTAAHCVGPNKADPNKLRVQLRKQYLYYHDHLLTVSQIISHPDFYIAQDGADIALLKLTNP 165

  Fly   126 LTFSSTIKAIGL--ASSNPANGAAASVSGWGTLSYG-SSSIPSQLQYVNVNIVSQSQCASSTYGY 187
            :..:|.:..:.|  ||....:|....|:|||.::.. |...|..|:.|.|.||....| ...|..
  Rat   166 VNITSNVHTVSLPPASETFPSGTLCWVTGWGNINNDVSLPPPFPLEEVQVPIVENRLC-DLKYHK 229

  Fly   188 GSQ-------IRSTMICAAASGKDACQGDSGGPLV----SGGVLVGVVSWGYGCAYSNYPGVYAD 241
            |..       :|..|:||...|.|:||||||||||    ...:..||||||.|||..|.||:|..
  Rat   230 GLNTGDNVHIVRDDMLCAGNEGHDSCQGDSGGPLVCKVEDTWLQAGVVSWGEGCAQPNRPGIYTR 294

  Fly   242 VAALRSWV 249
            |.....|:
  Rat   295 VTYYLDWI 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30031NP_725035.1 Tryp_SPc 30..249 CDD:214473 77/237 (32%)
Tpsab1NP_062195.2 Tryp_SPc 66..302 CDD:214473 77/236 (33%)
Tryp_SPc 66..302 CDD:238113 77/236 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X21
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.