DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30031 and Tpsg1

DIOPT Version :10

Sequence 1:NP_725035.1 Gene:CG30031 / 246404 FlyBaseID:FBgn0050031 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_001426649.1 Gene:Tpsg1 / 302990 RGDID:631355 Length:320 Species:Rattus norvegicus


Alignment Length:264 Identity:93/264 - (35%)
Similarity:136/264 - (51%) Gaps:24/264 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FVILLS--AVAC-ALGGTVPEGLLPQLDGRIVGGSATTISSFPWQISLQRSGSHSCGGSIYSSNV 65
            |::||:  .::| ||.....:..:.....|||||.|....::|||.||:....|.||||:.|...
  Rat     9 FLLLLAVPGISCEALQSGCGQPQVSHAGSRIVGGHAAQAGAWPWQASLRLQKVHVCGGSLLSPEW 73

  Fly    66 IVTAAHCLQ-SVSASVLQIRAG------SSYWSSGGVTFSVSSFKNHEGYNANTMVNDIAIIKIN 123
            ::|||||.. ||::|..::..|      |.::|:.......||.....|.:     .|||::::.
  Rat    74 VLTAAHCFSGSVNSSDYEVHLGELTITLSPHFSTVKQIIMYSSAPGPPGSS-----GDIALVQLA 133

  Fly   124 GALTFSSTIKAIGL--ASSNPANGAAASVSGWGTLSYGSS-SIPSQLQYVNVNIVSQSQCASS-T 184
            ..:..||.::.:.|  ||::...|....|:|||....|.. ..|..||...|::|....|:.: :
  Rat   134 TPVALSSQVQPVCLPEASADFHPGMQCWVTGWGYTQEGEPLKPPYNLQEAKVSVVDVETCSQAYS 198

  Fly   185 YGYGSQIRSTMICAAASGKDACQGDSGGPLVS--GGV--LVGVVSWGYGCAYSNYPGVYADVAAL 245
            ...||.|:|.|:||...| ||||.|||||||.  .|:  ..||||||.||...:.|||||.|.|.
  Rat   199 SSNGSLIQSDMLCAWGPG-DACQDDSGGPLVCRVAGIWQQAGVVSWGEGCGRPDRPGVYARVTAY 262

  Fly   246 RSWV 249
            .:|:
  Rat   263 VNWI 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30031NP_725035.1 Tryp_SPc 30..249 CDD:214473 86/233 (37%)
Tpsg1NP_001426649.1 None

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