DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30031 and F11

DIOPT Version :10

Sequence 1:NP_725035.1 Gene:CG30031 / 246404 FlyBaseID:FBgn0050031 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_001398595.1 Gene:F11 / 290757 RGDID:1309364 Length:622 Species:Rattus norvegicus


Alignment Length:235 Identity:82/235 - (34%)
Similarity:116/235 - (49%) Gaps:19/235 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 RIVGGSATTISSFPWQISLQRSGSHSCGGSIYSSNVIVTAAHCLQSV-SASVLQIRAG---SSYW 90
            |:.||:|:....:|||::|..:..|.|||||..:..|:|||||.... :...|::..|   .|..
  Rat   387 RVFGGAASVHGEWPWQVTLHTTQGHLCGGSIIGNRWILTAAHCFSGTETPKTLRVYGGIVNQSEI 451

  Fly    91 SSGGVTFSVSSFKNHEGYNANTMVNDIAIIKINGALTFSSTIKAIGLASSNPANGAAAS--VSGW 153
            :.....|.|.....|:.|.:.....|||::|:..|:.::...:.|.|.|....|.....  |:||
  Rat   452 NEDTTFFRVQEMIIHDQYTSAESGFDIALLKLEPAMNYTDFQRPICLPSKGDRNVVHTECWVTGW 516

  Fly   154 GTLSYGSS--SIPSQLQYVNVNIVSQSQCASSTYGYGSQIRSTMICAA--ASGKDACQGDSGGPL 214
            |   |..|  .:.|.||...|.:||..:|  .|.....:|.:.:|||.  ..|||.|:|||||||
  Rat   517 G---YTKSRDEVQSTLQKAKVPLVSNEEC--QTRYRKHKITNKVICAGYKEGGKDTCKGDSGGPL 576

  Fly   215 --VSGGV--LVGVVSWGYGCAYSNYPGVYADVAALRSWVI 250
              ...||  |||:.|||.||.....||||.:||....|::
  Rat   577 SCKHNGVWHLVGITSWGEGCGQKERPGVYTNVAKYVDWIL 616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30031NP_725035.1 Tryp_SPc 30..249 CDD:214473 81/232 (35%)
F11NP_001398595.1 APPLE 20..103 CDD:128519
APPLE 110..193 CDD:128519
APPLE 200..283 CDD:128519
APPLE 291..374 CDD:128519
Tryp_SPc 388..615 CDD:238113 80/231 (35%)
Blue background indicates that the domain is not in the aligned region.

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