DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30031 and Tmprss11g

DIOPT Version :10

Sequence 1:NP_725035.1 Gene:CG30031 / 246404 FlyBaseID:FBgn0050031 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_001008554.1 Gene:Tmprss11g / 289546 RGDID:1306446 Length:417 Species:Rattus norvegicus


Alignment Length:256 Identity:92/256 - (35%)
Similarity:125/256 - (48%) Gaps:33/256 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 CALGGTVPEGLLPQLDGRIVGGSATTISSFPWQISLQRSGSHSCGGSIYSSNVIVTAAHCLQSVS 77
            |.||...|.      ..||..|.....:|:|||.|||..|.|.||.|:..|..:||:|||..:..
  Rat   174 CGLGMEYPR------IARIADGKPAGSNSWPWQSSLQVEGIHLCGASLIGSQWLVTSAHCFDNYK 232

  Fly    78 ASVLQIRAGSSYWS-SGG-------VTFSVSSFKNHEGYNANTMVNDIAIIKINGALTFSSTIKA 134
            ...|        |: |.|       .|..|.|...||.|.|:...:|||::|::..:.||..::.
  Rat   233 NPKL--------WTVSFGRTLGNPLTTRKVESIIIHENYAAHKHDDDIAVVKLSSPVLFSENLRT 289

  Fly   135 IGL--ASSNPANGAAASVSGWGTLSYGSSSIPSQLQYVNVNIVSQSQCASSTYGYGSQIRSTMIC 197
            :.|  |:......:...|:|||.|. .:...|:.||.|.:.|:|...| :....||..|.|.|||
  Rat   290 VCLPEATFQVLPKSKVFVTGWGALK-ANGPFPNSLQEVEIEIISNDVC-NQVNVYGGAISSGMIC 352

  Fly   198 AA-ASGK-DACQGDSGGPLV-----SGGVLVGVVSWGYGCAYSNYPGVYADVAALRSWVIS 251
            |. .:|| |||:||||||||     :...|:|:||||..|...|.||:|..|...|:|:.|
  Rat   353 AGFLTGKLDACEGDSGGPLVISDNRNKWYLLGIVSWGIDCGKENKPGIYTRVTHYRNWIKS 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30031NP_725035.1 Tryp_SPc 30..249 CDD:214473 86/235 (37%)
Tmprss11gNP_001008554.1 SEA 48..146 CDD:460188
Tryp_SPc 185..411 CDD:214473 86/235 (37%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.