DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30031 and Gzma

DIOPT Version :10

Sequence 1:NP_725035.1 Gene:CG30031 / 246404 FlyBaseID:FBgn0050031 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_703198.2 Gene:Gzma / 266708 RGDID:628640 Length:261 Species:Rattus norvegicus


Alignment Length:231 Identity:64/231 - (27%)
Similarity:107/231 - (46%) Gaps:19/231 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 VPEGLLPQLDG--RIVGGSATTISSFPWQISLQRSGSHSCGGSIYSSNVIVTAAHCLQSVSASVL 81
            :|||      |  ||:||......|.|:.:.|:......|.|::.:.|.::|||||:....:.|:
  Rat    21 IPEG------GCERIIGGDTVVPHSRPYMVLLKLKPDSVCAGALIAKNWVLTAAHCIPGKKSEVI 79

  Fly    82 QIRAGSSYWSSGGVTFSVSSFKNHEGYNANTMVNDIAIIKINGALTFSSTIKAIGL--ASSNPAN 144
             :.|.|..........||.....:..::.:|...|:.::::....|.:..:..:.|  ...:...
  Rat    80 -LGAHSIKKEPEQQILSVKKAYPYPCFDKHTHEGDLQLLRLKKKATLNKNVAILHLPKKGDDVKP 143

  Fly   145 GAAASVSGWGTLSYGSSSIPSQ-LQYVNVNIVSQSQCASST-YGYGSQIRSTMICAA--ASGKDA 205
            |....|:|||  .:.:.|.||. |:.||:.::.:..|.... |.:...|...||||.  ..|||:
  Rat   144 GTRCHVAGWG--RFHNKSPPSDTLREVNITVIDRKICNDEKHYNFNPVIGLNMICAGNLRGGKDS 206

  Fly   206 CQGDSGGPLVSGGVLVGVVSWGY--GCAYSNYPGVY 239
            |.|||||||:..|:..|:.::|.  .|.....||:|
  Rat   207 CYGDSGGPLLCEGIFRGITAFGLEGTCGDPKGPGIY 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30031NP_725035.1 Tryp_SPc 30..249 CDD:214473 60/218 (28%)
GzmaNP_703198.2 Tryp_SPc 29..256 CDD:238113 59/217 (27%)

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