DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30025 and tmprss4a

DIOPT Version :10

Sequence 1:NP_725036.1 Gene:CG30025 / 246398 FlyBaseID:FBgn0050025 Length:253 Species:Drosophila melanogaster
Sequence 2:XP_005157547.2 Gene:tmprss4a / 777630 ZFINID:ZDB-GENE-061103-631 Length:458 Species:Danio rerio


Alignment Length:280 Identity:104/280 - (37%)
Similarity:137/280 - (48%) Gaps:55/280 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 CALGGTVPE--------------------------GLLPQLDGRIVGGSATTISSFPWQISLQRS 51
            |.:|.|.|:                          ||....| |||||....|:::|||:|||.|
Zfish   181 CMVGTTKPQTFQSAVSDRKVCSTGTVISLSCSADCGLSRNQD-RIVGGKDADIANWPWQVSLQYS 244

  Fly    52 GSHSCGGSIYSSNVIVTAAHCLQSVSASVLQIRAGSSYWS-SGGVTFSVSSFKNHEGYNANTMVN 115
            |.|:||||:.:.|.:||||||........|      |.|: ..|:|:..|:   ...|....:||
Zfish   245 GQHTCGGSLVTPNWVVTAAHCFNGDGRKAL------SRWTVVSGITYLSST---PSSYVKEIIVN 300

  Fly   116 ----------DIAIIKINGALTFSSTIKAIGLASSNPA--NGAAASVSGWGTLSYGSSSIPSQLQ 168
                      ||.:||:...:|.|.:.:.:.|...|..  .|....|:|||.::....|:.|.||
Zfish   301 SNYKPAESDFDITMIKLQSPITLSESRRPVCLPPQNLGLKGGDGLVVTGWGHMAEKGGSLSSMLQ 365

  Fly   169 YVNVNIVSQSQCASSTYGYGSQIRSTMICAA--ASGKDACQGDSGGPLV---SGGVLVGVVSWGY 228
            ...:.::..:||:|.|. |||.|.|.||||.  |.|.||||||||||||   ...|||||||||.
Zfish   366 KAQIQVIDSAQCSSPTV-YGSSITSRMICAGVMAGGVDACQGDSGGPLVHLADRWVLVGVVSWGV 429

  Fly   229 GCAYSNYPGVYADVAALRSW 248
            |||...:||||.:|..:..|
Zfish   430 GCARPGFPGVYTNVDQMLDW 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30025NP_725036.1 Tryp_SPc 30..249 CDD:214473 97/237 (41%)
tmprss4aXP_005157547.2 None

Return to query results.
Submit another query.