DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30025 and tmprss4b

DIOPT Version :9

Sequence 1:NP_725036.1 Gene:CG30025 / 246398 FlyBaseID:FBgn0050025 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_001119849.1 Gene:tmprss4b / 327651 ZFINID:ZDB-GENE-030131-5862 Length:432 Species:Danio rerio


Alignment Length:253 Identity:95/253 - (37%)
Similarity:132/253 - (52%) Gaps:28/253 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 AVACALGGTVPEGLLPQLDGRIVGGSATTISSFPWQISLQRSGSHSCGGSIYSSNVIVTAAHCLQ 74
            :|:|:..|.|..      :.|||||..|:|..:|||:|||.:..|.||||:.|::.|::||||..
Zfish   187 SVSCSDCGEVVG------EDRIVGGVETSIEHWPWQVSLQFNHRHMCGGSLLSTSWIISAAHCFT 245

  Fly    75 SVSASVLQIRAGSSYWS--------SGGVTFSVSSFKNHEGYNANTMVNDIAIIKINGALTFSST 131
            ..:..:       |.|:        ...|..||.....|:.||..|...|||::|:...:....:
Zfish   246 GRTQEL-------SRWTVVLGQTKVMDVVGVSVDMIVIHKDYNRLTNDFDIAMLKLTWPVKTGES 303

  Fly   132 IKAIGLASSNPANGAAASVSGWGTLSYGSSSIPSQLQYVNVNIVSQSQCASSTYGYGSQIRSTMI 196
            |..:.|.....|......|:|||.|..| .::|:.||..:|.:|::|:|:..|. |.|.|...|:
Zfish   304 ILPVCLPPHQLAIKDMLVVTGWGLLKEG-GALPTVLQKASVPLVNRSECSKPTI-YSSSITPRML 366

  Fly   197 CAA--ASGKDACQGDSGGPLV---SGGVLVGVVSWGYGCAYSNYPGVYADVAALRSWV 249
            ||.  ....||||||||||||   |...|:|:||||.|||....|||||||..|..|:
Zfish   367 CAGFLQGNVDACQGDSGGPLVYLSSRWQLIGIVSWGVGCAREGKPGVYADVTQLLDWI 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30025NP_725036.1 Tryp_SPc 30..249 CDD:214473 90/231 (39%)
Tryp_SPc 31..252 CDD:238113 90/232 (39%)
tmprss4bNP_001119849.1 SRCR_2 100..179 CDD:292133
SRCR 105..>175 CDD:278931
Tryp_SPc 201..424 CDD:214473 90/231 (39%)
Tryp_SPc 202..427 CDD:238113 90/232 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.