DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30025 and Tmprss11b

DIOPT Version :10

Sequence 1:NP_725036.1 Gene:CG30025 / 246398 FlyBaseID:FBgn0050025 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_795998.2 Gene:Tmprss11b / 319875 MGIID:2442893 Length:416 Species:Mus musculus


Alignment Length:243 Identity:87/243 - (35%)
Similarity:124/243 - (51%) Gaps:20/243 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 GLLPQLDG---RIVGGSATTISSFPWQISLQRSGSHSCGGSIYSSNVIVTAAHCLQSV-SASVLQ 82
            |..|::..   ||.|||......:|||.||:.:|.|.||.|:.....::|||||.|.. :...|.
Mouse   173 GRRPRMSATYDRITGGSTAHKGEWPWQASLRVNGKHYCGASLIGERFLLTAAHCFQGTNNPKNLT 237

  Fly    83 IRAGSSYWSSGGVTFSVSSFKNHEGYNANTMVNDIAIIKINGALTFSSTIKAIGLASSN----PA 143
            :..|:.. :...:..||.....||.|......:|:|:||:...::|::.:..:.|..|.    |.
Mouse   238 VSFGTRV-TPAYMQHSVQEIIIHEDYVKGEHHDDVAVIKLTEKVSFNNDVHRVCLPESTQIFPPG 301

  Fly   144 NGAAASVSGWGTLSYGSSSIPSQLQYVNVNIVSQSQCASSTYGYGSQIRSTMICAA--ASGKDAC 206
            .|..  |:|||:.||...| |..||..::.|:..:.| :|...||.:|..||:||.  ....|||
Mouse   302 EGVV--VTGWGSFSYNGKS-PLLLQKASIKIIDTNTC-NSEEAYGGRIVDTMLCAGYLEGSIDAC 362

  Fly   207 QGDSGGPLVSGG-----VLVGVVSWGYGCAYSNYPGVYADVAALRSWV 249
            |||||||||...     .|||:||||:.|...|.||||..|.:.|:|:
Mouse   363 QGDSGGPLVHPNSRDIWYLVGIVSWGHECGRVNKPGVYMRVTSYRNWI 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30025NP_725036.1 Tryp_SPc 30..249 CDD:214473 84/230 (37%)
Tmprss11bNP_795998.2 SEA 46..143 CDD:460188
Tryp_SPc 185..413 CDD:238113 84/231 (36%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.