DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30025 and Ovch2

DIOPT Version :10

Sequence 1:NP_725036.1 Gene:CG30025 / 246398 FlyBaseID:FBgn0050025 Length:253 Species:Drosophila melanogaster
Sequence 2:XP_003749007.2 Gene:Ovch2 / 308919 RGDID:1564636 Length:579 Species:Rattus norvegicus


Alignment Length:256 Identity:86/256 - (33%)
Similarity:127/256 - (49%) Gaps:34/256 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 PQ----LDGRIVGGSATTISSFPWQISLQRSGSHSCGGSIYSSNVIVTAAHCLQSVS-ASVLQIR 84
            ||    |..||||||.....|:|||:||::...|.|||:|.||..::|||||:.:.: |..|.:.
  Rat    42 PQNYFSLFSRIVGGSQVEKGSYPWQVSLKQKQKHICGGTIISSQWVITAAHCMANRNIALTLNVT 106

  Fly    85 AGS---SYWSSGGVTFSVSSFKNHEGYNANTMVN-DIAIIKINGALTFSSTIKAIGLASSNPAN- 144
            ||.   |....|..|.::.:...|..::....:| |||::|:.|...|...::.:.|  ..|.. 
  Rat   107 AGEHDLSQAEPGEQTLAIETIIIHPQFSTKKPMNYDIALLKMVGTFQFGQFVRPVCL--PEPGEQ 169

  Fly   145 ---GAAASVSGWGTLSYGSSSIPSQLQYVNVNIVSQSQCASSTYGYGSQIR-STMICAAA--SGK 203
               |...:.:|||.||.| .|:|..||.||:.|::..:|.:......:.|. .|.:|..:  .|:
  Rat   170 FNAGYICTTAGWGRLSEG-GSLPQVLQQVNLPILTHEECEAVMLTLRNPITGKTFLCTGSPDGGR 233

  Fly   204 DACQGDSGGPLV-----SGGVLVGVVSWGYGCAYS----------NYPGVYADVAALRSWV 249
            |||||||||.|:     ....|.||.|||.||..|          ..||::.|:..:..|:
  Rat   234 DACQGDSGGSLMCQNRKGAWTLAGVTSWGLGCGRSWRNNARKKEQGSPGIFTDLRRVLPWI 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30025NP_725036.1 Tryp_SPc 30..249 CDD:214473 82/245 (33%)
Ovch2XP_003749007.2 Tryp_SPc 52..297 CDD:238113 82/246 (33%)
CUB 317..420 CDD:238001
CUB 431..541 CDD:238001
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.