DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30025 and Elane

DIOPT Version :10

Sequence 1:NP_725036.1 Gene:CG30025 / 246398 FlyBaseID:FBgn0050025 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_001100237.1 Gene:Elane / 299606 RGDID:1307968 Length:271 Species:Rattus norvegicus


Alignment Length:239 Identity:76/239 - (31%)
Similarity:118/239 - (49%) Gaps:33/239 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 PQLDGRIVGGSATTISSFPWQISLQRSGSHSCGGSIYSSNVIVTAAHCLQSVSASVLQIRAGSSY 89
            |.|...||||......::|:.:||||.|.|.||.::.:.|.:::||||:...:...:|:..|:..
  Rat    27 PALASEIVGGRPAQPHAWPFMVSLQRRGGHFCGATLIARNFVMSAAHCVNGRNFQSVQVVLGAHD 91

  Fly    90 WSSGGVT---FSVSS-FKNHEGYNANTMVNDIAIIKINGALTFSSTIKAIGLASSNPANGAAAS- 149
            ......|   |||.. |:|  |::.:.::|||.||::||:.|.::.::...|    ||.|.... 
  Rat    92 LRRREPTRQIFSVQRIFEN--GFDPSRLLNDIVIIQLNGSATINANVQVAEL----PAQGQGVGN 150

  Fly   150 -----VSGWGTLSYGSSSIPSQLQYVNVNIVSQSQCASSTYGYGSQIRSTMICAAASGKDA--CQ 207
                 ..|||.|. .:..:||.||.:||.:|: :.|.          |...:|.....:.|  |.
  Rat   151 RTPCVAMGWGRLG-TNRPLPSVLQELNVTVVT-NLCR----------RRVNVCTLVPRRQAGICF 203

  Fly   208 GDSGGPLVSGGVLVGVVSW--GYGCAYSNYPGVYADVAALRSWV 249
            ||||||||...::.|:.|:  | ||....||..:|.||....|:
  Rat   204 GDSGGPLVCNNLVQGIDSFIRG-GCGSGFYPDAFAPVAEFADWI 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30025NP_725036.1 Tryp_SPc 30..249 CDD:214473 73/232 (31%)
ElaneNP_001100237.1 Tryp_SPc 33..249 CDD:238113 74/233 (32%)

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