DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30025 and LOC100004427

DIOPT Version :10

Sequence 1:NP_725036.1 Gene:CG30025 / 246398 FlyBaseID:FBgn0050025 Length:253 Species:Drosophila melanogaster
Sequence 2:XP_005163955.1 Gene:LOC100004427 / 100004427 -ID:- Length:302 Species:Danio rerio


Alignment Length:263 Identity:76/263 - (28%)
Similarity:127/263 - (48%) Gaps:35/263 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ILLSAVACALGGTVPEGLLPQLDGRIVGGSATTISSFPWQ--ISLQRSGSHSCGGSIYSSNVIVT 68
            :||:...| ||.:...|..| |:.:||||...|..|:|||  |:.:.:|...|.||:.|...::|
Zfish    13 VLLNIAGC-LGQSDVCGRAP-LNTKIVGGLNATEGSWPWQASINFKSTGQFFCSGSLISERWVLT 75

  Fly    69 AAHCLQSVSASVLQI------RAGSSYWSSGGVTFSVSSFKNHEGYNANTMVNDIAIIKINGALT 127
            ||.|.|.::.|.:.|      ..||:.:........||            :..|||:::::.::|
Zfish    76 AASCFQRINVSDVVIYLGRLTTNGSNPYEIPRTVIQVS------------VTEDIALVQLSSSVT 128

  Fly   128 FSSTIKAIGLASSNP--ANGAAASVSGWGTLSYGSSSIPSQLQYVNVNIVSQSQCASSTYGYGSQ 190
            |:..|:.:.||::..  .:|..:.|:|||:.|..:..:...|:.|...||:..:|::..   |..
Zfish   129 FTDYIRPVCLAAAGSVFVDGTESWVTGWGSTSSTNVILSDMLKEVEAPIVNNIECSNIN---GIT 190

  Fly   191 IRSTMICAA---ASGKDACQGDSGGPLV----SGGVLVGVVSWGYGCAYSNYPGVYADVAALRSW 248
            ....:|||.   .:||..|..|.|.|||    |..:..|||.:.: |..:.:|.:||.|:....|
Zfish   191 NLDNVICAGFVNETGKAPCWEDFGSPLVTRQGSQWIQSGVVVFTF-CGQNGFPTLYARVSEYEEW 254

  Fly   249 VIN 251
            :.|
Zfish   255 IRN 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30025NP_725036.1 Tryp_SPc 30..249 CDD:214473 66/235 (28%)
LOC100004427XP_005163955.1 Tryp_SPc 36..257 CDD:238113 67/236 (28%)

Return to query results.
Submit another query.