DRSC/TRiP Functional Genomics Resources

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Protein Alignment sprt and PDZD3

DIOPT Version :9

Sequence 1:NP_610683.1 Gene:sprt / 246397 FlyBaseID:FBgn0082585 Length:634 Species:Drosophila melanogaster
Sequence 2:XP_011541302.1 Gene:PDZD3 / 79849 HGNCID:19891 Length:571 Species:Homo sapiens


Alignment Length:131 Identity:30/131 - (22%)
Similarity:47/131 - (35%) Gaps:30/131 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 IDIRIRQAELEYALGREELQMLSIVEEARALQAR-----LEKSKPEAQTLYNIISSGVSLSLHAV 222
            :.:.:...|:|....:..|.:.:.:.|..||..:     |||. |:          |....|...
Human   293 VTLLVAGPEVEEQCRQLGLPLAAPLAEGWALPTKPRCLHLEKG-PQ----------GFGFLLREE 346

  Fly   223 HATSGR-----WAVQQRTDQPGFYVEWALEGDGLYKGDRILEINGRLVTGKSKEELQKQVGNSGK 282
            ....||     |.|     .||...:.|    |:..|||::.:.|..|.|...||...::...|.
Human   347 KGLDGRPGQFLWEV-----DPGLPAKKA----GMQAGDRLVAVAGESVEGLGHEETVSRIQGQGS 402

  Fly   283 C 283
            |
Human   403 C 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sprtNP_610683.1 PDZ <247..288 CDD:294084 11/37 (30%)
PDZD3XP_011541302.1 PDZ_signaling 113..193 CDD:238492
PDZ_signaling 221..298 CDD:238492 0/4 (0%)
PDZ 326..411 CDD:214570 24/98 (24%)
PDZ_signaling 466..545 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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