DRSC/TRiP Functional Genomics Resources

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Protein Alignment sprt and Grip1

DIOPT Version :9

Sequence 1:NP_610683.1 Gene:sprt / 246397 FlyBaseID:FBgn0082585 Length:634 Species:Drosophila melanogaster
Sequence 2:XP_006514294.1 Gene:Grip1 / 74053 MGIID:1921303 Length:1185 Species:Mus musculus


Alignment Length:314 Identity:62/314 - (19%)
Similarity:110/314 - (35%) Gaps:76/314 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 GCGSAVKYSLHSTAETNQETASTTTTSTHCSTTGRRRKGG---------SLGGTLSSRSTRSESK 88
            |.|..::.|:.:|     ||.|:....::........:.|         ::.|..:..||..|:.
Mouse   538 GFGIQLQGSVFAT-----ETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEAN 597

  Fly    89 ELRSALQDREAVIQ-NLRIQLCLG------------KLPRPTGPPL------DESEKPAAEQKLN 134
            :|   |:|.....: .|.|:..:.            |||:.....|      ..|.||.....::
Mouse   598 QL---LRDSSITSKVTLEIEFDVAESVIPSSGTFHVKLPKKHSVELGITISSPSSRKPGDPLVIS 659

  Fly   135 RLKTEAENKRIKIKNLKSALEKLDITDNIDIRIRQAELEYALGREELQMLSIVEEARALQARLEK 199
            .:|..:...|.....|...|..:|     :||:....:|     :.:|:|...|:...|:.|.::
Mouse   660 DIKKGSVAHRTGTLELGDKLLAID-----NIRLDNCSME-----DAVQILQQCEDLVKLKIRKDE 714

  Fly   200 SKPEAQTLYNIISSGVSLSLHAVHATSGRWAVQ-QRTDQP-----------GFYVEWALEGDGLY 252
            ...:.|.     |||..:....:....|...:. ..|::|           |...|   ....::
Mouse   715 DNSDEQE-----SSGAIIYTVELKRYGGPLGITISGTEEPFDPIIISSLTKGGLAE---RTGAIH 771

  Fly   253 KGDRILEINGRLVTGKSKEELQKQVGNSGKCQMVVLRK----------KSVPIP 296
            .|||||.||...:.||...|....:..:|:...:.::|          |..|||
Mouse   772 IGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKKQTDAQSASSPKKFPIP 825

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sprtNP_610683.1 PDZ <247..288 CDD:294084 11/40 (28%)
Grip1XP_006514294.1 PDZ_signaling 110..190 CDD:238492
PDZ_signaling 209..292 CDD:238492
PDZ_signaling 307..390 CDD:238492
PDZ_signaling 526..614 CDD:238492 16/83 (19%)
PDZ_signaling 627..711 CDD:238492 19/93 (20%)
PDZ_signaling 727..808 CDD:238492 16/83 (19%)
PDZ_signaling 1058..1138 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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