DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sprt and Pdzk1

DIOPT Version :9

Sequence 1:NP_610683.1 Gene:sprt / 246397 FlyBaseID:FBgn0082585 Length:634 Species:Drosophila melanogaster
Sequence 2:NP_001139473.1 Gene:Pdzk1 / 59020 MGIID:1928901 Length:519 Species:Mus musculus


Alignment Length:560 Identity:98/560 - (17%)
Similarity:176/560 - (31%) Gaps:210/560 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 HCSTTGRRRKGGS------LGGTLSSRSTRS--ESKELRSALQDREAVIQNLRIQLCLGKLPRPT 117
            |.......||.|:      |.|....::.::  :.|||..:  .|||.:.:        |.|   
Mouse    68 HAQVVELVRKSGNSVTLLVLDGDSYEKAVKNQVDLKELDQS--QREAALND--------KKP--- 119

  Fly   118 GPPLDESEKPAAEQKLNRLKTEAENKRIKIKNLKSALEKLDITDNIDIRIRQAELEYALGREELQ 182
            ||.::.:.:|.|:.:|..|..|..:....:|.::                         |::.:.
Mouse   120 GPGMNGAVEPCAQPRLCYLVKEGNSFGFSLKTIQ-------------------------GKKGVY 159

  Fly   183 MLSIVEEARALQA--------------RLEKSKPEAQTLYNIISSGVSLSLHAVHATSGRWAVQQ 233
            :.:|:.:..|::|              .:|.:..| :.:..:..||..:....|...:.|...:|
Mouse   160 LTNIMPQGVAMKAGVLADDHLIEVNGENVENASHE-EVVEKVTKSGSRIMFLLVDKETARCHSEQ 223

  Fly   234 RTD-------------QP------------GFYVEWA----------------LEGDGLYKGDRI 257
            :|.             ||            |||:...                .|..||...|.:
Mouse   224 KTQFKRETASLKLLPHQPRVVVIKKGSNGYGFYLRAGPEQKGQIIKDIEPGSPAEAAGLKNNDLV 288

  Fly   258 LEINGRLVTGKSKEELQKQVGNSGKCQMVVLRKKSVPIPQKQLDQEKENNMRLQHRISYLEEQVR 322
            :.:|     |||.|.|.    :.|..:|:          :|..||.         .:..|:::..
Mouse   289 VAVN-----GKSVEALD----HDGVVEMI----------RKGGDQT---------TLLVLDKEAE 325

  Fly   323 ELQTVKEHHPSQQQQQQQQQQQNPQQNPQQNPQQTSSNQSQHVTSISISSPPSTPPE--KPLIF- 384
            .:.::....|....|.|:....:.::.|...|....:..|:          |:...|  ||.:. 
Mouse   326 SIYSLARFSPLLYCQSQELPNGSVKEGPAPIPAPLEATGSE----------PTEDAEGHKPKLCR 380

  Fly   385 -----------------QRGNYITTLVGGKP------------IELMGDDMASTQTPPGHVTKTL 420
                             |.|:::..:..|.|            ||:.|:::  .:.|...|.:.:
Mouse   381 LLKEDDSYGFHLNAIRGQPGSFVKEVQQGGPADKAGLENEDVIIEVNGENV--QEEPYDRVVERI 443

  Fly   421 IKENTHIDLR--DRLSHMYSMPSKSLSASKISINSDSAYMQHHRRDKERHRDRQHRERPRDPLQQ 483
            .....|:.|.  .::::.|      ..|.||.|.|..|                      :||..
Mouse   444 KSSGKHVTLLVCGKMAYSY------FQAKKIPIVSSMA----------------------EPLVA 480

  Fly   484 QQQLHREHLMSTHARSVEHLNHYNGLDRRRDTPRQSESNT 523
            ......|    |.|.| ||..| ...||...|...|.||:
Mouse   481 GPDEKGE----TSAES-EHDAH-PAKDRTLSTASHSSSNS 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sprtNP_610683.1 PDZ <247..288 CDD:294084 12/40 (30%)
Pdzk1NP_001139473.1 PDZ_signaling 7..87 CDD:238492 4/18 (22%)
PDZ 132..212 CDD:214570 12/105 (11%)
PDZ_signaling 242..320 CDD:238492 18/105 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 348..374 5/35 (14%)
PDZ_signaling 376..455 CDD:238492 12/80 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 479..519 13/42 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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