DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sprt and grip2a

DIOPT Version :9

Sequence 1:NP_610683.1 Gene:sprt / 246397 FlyBaseID:FBgn0082585 Length:634 Species:Drosophila melanogaster
Sequence 2:XP_017212845.1 Gene:grip2a / 568084 ZFINID:ZDB-GENE-081104-132 Length:1100 Species:Danio rerio


Alignment Length:713 Identity:134/713 - (18%)
Similarity:212/713 - (29%) Gaps:304/713 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 HRAFAKQKSASMTILNPKGCGSAVKYSLHSTAETNQETASTT---TTSTHCSTTGRRRK------ 70
            ||:.:...||:.:..:...|||       .:|..|...:||.   .:|..||.|.||.:      
Zfish   419 HRSVSSGVSANTSGFHSYNCGS-------QSAYPNTYPSSTLPSYPSSPRCSATKRRHRRKEHKS 476

  Fly    71 -----------GGSL-----------------------GGT------------------------ 77
                       ||.:                       ||.                        
Zfish   477 SLSLASSTVGAGGQVVHLESAEVLLRGDPLTGFGLQLQGGVFATEPLSAPAAIRFIEPDTPAERC 541

  Fly    78 ---------LSSRSTRSESKELRSALQ-DREAVIQN---LRIQLCLG------------KLP--- 114
                     ||.....:|...|..|.| .|:|.:.|   |.::..:.            |||   
Zfish   542 GVLQVGDRILSINGIPTEDGTLEEANQLLRDAALANKIALEVEFDVAESVIPSSGTFQVKLPKRR 606

  Fly   115 -----------RPTGPPL--DESEKPAAEQKLNRLKTEAENKRIKIKNLKSALEKLDITDNIDIR 166
                       :..|.||  .|.:|.:...::..|  |..::.:.|.|::        .||    
Zfish   607 GVELGITISASKKAGKPLIISEIQKGSIAHRIGTL--EPGDRLLAIDNVR--------LDN---- 657

  Fly   167 IRQAELEYALGREELQMLSIVEEARAL-QARLEKSKPEAQTLYNIISSG-----VSLSLHAVHAT 225
                     .|.||..|  ::::|..: :.|::|   :...|..:.|||     |.|..|     
Zfish   658 ---------CGMEEAMM--VLQQAEGMVKLRIQK---DEDNLDELESSGSVIFTVELKRH----- 703

  Fly   226 SGRWAVQ-QRTDQP------------GFYVEWALEGDGLYKGDRILEINGRLVTGKSKEELQKQV 277
            .|...:. ..|::|            |.    |.....|:.|||:|.||...:.||...|....:
Zfish   704 GGPLGITISGTEEPFNPILISSLTRNGL----AHRTGALHIGDRVLAINNMSLKGKPLSEAIHLL 764

  Fly   278 GNSGKCQMVVLRKKSVPIPQKQLDQEKENNMRLQHRISYLEEQVRELQTVKEHHPSQQQQQQQQQ 342
            ..:|....:.::|:|.|:    ||.|:.:..|....:|.:|:                       
Zfish   765 QTAGDTVTLKIKKRSDPL----LDSERGSPSRTASCVSDMED----------------------- 802

  Fly   343 QQNPQQNPQQNPQQTSSNQSQHVTSISISSPPSTPPEKPLIFQRGNYITTLVGGKPIELMGDDMA 407
                                                ::...|:||.|              .|:.
Zfish   803 ------------------------------------DRSDSFRRGKY--------------SDLL 817

  Fly   408 STQTPPGHVTKTLIKENTHIDLRDRLSHMYSMPSKSLSASKISINSDSAYMQHHRRDKERHRDRQ 472
            ...|||.            :|     |.|.|..|.:|.|   ...|...|: |...|...|....
Zfish   818 RQTTPPS------------LD-----SAMDSWDSSALDA---GYGSQGVYI-HRPSDFTLHPSDW 861

  Fly   473 HRERPRDPLQQQQQLHREHLMS--------THARSVEHL--NHYNGL---------DRRRDTPRQ 518
            .:...|.||..::..||..:..        |::.||...  ::||..         ...:|....
Zfish   862 RQTNHRSPLMSRRPAHRPTVYDGRLSEEDWTYSGSVSPACGHNYNSTTDAQENYWSQALQDLETC 926

  Fly   519 SESNTLRARLPSDMRSVKSL----DFDSENESK----PATETRTTRPTP-------PKKPLRL 566
            .:|..|| .|.:.:.|..:|    ||:.:||||    ..:...|:..||       |..||.|
Zfish   927 GQSEILR-ELEATIMSGSTLSLGEDFEKQNESKTKFLELSPENTSVNTPEDLKENSPSVPLEL 988

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sprtNP_610683.1 PDZ <247..288 CDD:294084 11/40 (28%)
grip2aXP_017212845.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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