DRSC/TRiP Functional Genomics Resources

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Protein Alignment sprt and pdzd3a

DIOPT Version :9

Sequence 1:NP_610683.1 Gene:sprt / 246397 FlyBaseID:FBgn0082585 Length:634 Species:Drosophila melanogaster
Sequence 2:XP_685398.3 Gene:pdzd3a / 557269 ZFINID:ZDB-GENE-080430-1 Length:520 Species:Danio rerio


Alignment Length:441 Identity:87/441 - (19%)
Similarity:144/441 - (32%) Gaps:162/441 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 RRRKGGSLGGTLSSRSTRSESKELRSALQDREAVIQNLRIQLCLGKLPRPTGPPLDESEKPAAEQ 131
            ||.:|...|..||..:.|.....:|.......|....|||           |..:.|..:...:.
Zfish    67 RREEGQGFGFYLSRDAGRCRGHVVRQVEPWSSAERAGLRI-----------GDHVLEVNEDFVDD 120

  Fly   132 KLNRLKTEAENKRIKIKNLKSALEKLDITDNIDIRIRQAELEYAL--GREELQMLSIVEEARALQ 194
            |        |:..:.:|...|.| ||.:     :.:...:.|:|:  ||:   :||:....|...
Zfish   121 K--------EHSTVVLKVQASGL-KLYL-----LVLSAQDYEFAVSEGRD---LLSVARSYRPEG 168

  Fly   195 ARLEKSKPEAQTLYNIISSGVSLSLHAVHATSGRWAVQQRTDQPGFYVEWALEGDGLYKGDRILE 259
            .    |:|....:......|:.||:..:....||:.:...||.|.       |..|:..|||::.
Zfish   169 C----SRPRLCHITKEPGCGLGLSIIPIEGARGRYRLNPVTDGPA-------ERAGIQNGDRLIW 222

  Fly   260 INGRLVTGKSKEELQKQVGNSGKCQ----MVVLRKKS--------VPI----------------- 295
            |||..::..|...|.|.|   .||:    ::|:..:|        :||                 
Zfish   223 INGVSISVISYAALAKMV---KKCEKHLTVLVIDSRSEEIYNRMGLPIIPAFAETHNLPYRPKTL 284

  Fly   296 -----PQKQ---LDQEKENNMRLQHRISYLEEQVRELQTVKEHHPSQQ--------------QQQ 338
                 ||..   |.|||..:.|:.|.:       ||:....   |::.              :|.
Zfish   285 HLTQGPQGYGFLLRQEKLRSGRIAHIL-------REIDPCS---PAETAGMEDGEIVLAVNGEQV 339

  Fly   339 QQQQQQNPQQNPQQNPQQTSSNQSQHVTSISIS-----------------------SPPSTP--- 377
            :..:.:......:|:.||.:      :|:|||:                       .|.:||   
Zfish   340 EDAEHEGIVSKIRQSGQQVT------LTTISIAGRDFYTQLAMSPLLFYDEHIPKCEPFATPALE 398

  Fly   378 -------PEKPLIFQ------------------RGNYITTLVGGKPIELMG 403
                   |.:|.:.:                  .|.||..:|.|...|..|
Zfish   399 HPEGHQNPPQPRLCELHKEGTGFGFNLGCVENKPGTYIGQVVSGSTGERAG 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sprtNP_610683.1 PDZ <247..288 CDD:294084 14/44 (32%)
pdzd3aXP_685398.3 PDZ_signaling 61..142 CDD:238492 21/99 (21%)
PDZ_signaling 172..252 CDD:238492 23/89 (26%)
PDZ 280..363 CDD:214570 16/98 (16%)
PDZ 408..490 CDD:214570 8/42 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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