DRSC/TRiP Functional Genomics Resources

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Protein Alignment sprt and Patj

DIOPT Version :9

Sequence 1:NP_610683.1 Gene:sprt / 246397 FlyBaseID:FBgn0082585 Length:634 Species:Drosophila melanogaster
Sequence 2:NP_477342.1 Gene:Patj / 44100 FlyBaseID:FBgn0067864 Length:871 Species:Drosophila melanogaster


Alignment Length:390 Identity:86/390 - (22%)
Similarity:139/390 - (35%) Gaps:131/390 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 ALQDREAVIQNLRIQLCLGKLPR---PTGPP--LDESEKPAAEQKLNRLKTEAENKRIKIKNLKS 152
            ||:...||:.. |:.:...:|.|   .||.|  ..||...:..|      |..|:.|...:...|
  Fly   239 ALEPGTAVVPT-RVLVDPAELERYLISTGYPEIFGESSTASTPQ------TTTEDDRFVYRGETS 296

  Fly   153 ALEKLDITDNIDIRIRQAELEYALGREELQMLSIVEEARALQARLEKSKPEAQTLYNIISSGVSL 217
            .|    |..|||:             |||..|   .|...||..|:|.           ::|:.:
  Fly   297 ML----IDPNIDL-------------EELLAL---PETEKLQVELKKD-----------ANGLGI 330

  Fly   218 SLHAVHATSGRWAVQQRTDQPGFYVEWALEGDG------LYKGDRILEINGRLVTGKSKEELQKQ 276
            ::...        |.::.:..|.:|:....|..      :...|||:|::|:.:.|.|..     
  Fly   331 TIAGY--------VCEKEELSGIFVKSVSPGSAADLSGRIRVNDRIIEVDGQSLQGYSNH----- 382

  Fly   277 VGNSGKCQMVVLRKKSVPIPQKQLDQEKENNMRLQHRISYLE----EQVRELQTVKEHHPSQQQQ 337
                   |.|.|.|||..:.          |:||:.   ||.    ||:::.....:..||    
  Fly   383 -------QAVELLKKSGQVV----------NLRLER---YLRGPKFEQLQQAIAANDKLPS---- 423

  Fly   338 QQQQQQQNPQQNPQQNPQQTSSN----QSQHVT----SISISSPP---STPPEKPLIFQRGNYIT 391
               .....|.:.|...|..|:|:    .|:.:|    ..::.:|.   :|||.          :|
  Fly   424 ---SAPGTPSRAPMPTPVATTSSATTTPSRSITRELEEEALPAPEAFMTTPPS----------VT 475

  Fly   392 TLV--------GGKPIELMGDDM-ASTQTPPGHVT----KTLIKENTHIDLRDRLSHMYSMPSKS 443
            |:.        .||.:..:.|.: .||:..|..|.    ||..| |:.:..|.:   .|:.|..|
  Fly   476 TMTTTTLSSFGAGKQLVAVRDSLDGSTKIIPTEVVPLADKTEAK-NSGVITRHK---YYTDPELS 536

  Fly   444  443
              Fly   537  536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sprtNP_610683.1 PDZ <247..288 CDD:294084 10/46 (22%)
PatjNP_477342.1 L27 12..70 CDD:295425
PDZ_signaling 154..226 CDD:238492
PDZ_signaling 318..400 CDD:238492 23/122 (19%)
PDZ_signaling 557..643 CDD:238492
PDZ_signaling 726..807 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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