DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sprt and dysc

DIOPT Version :9

Sequence 1:NP_610683.1 Gene:sprt / 246397 FlyBaseID:FBgn0082585 Length:634 Species:Drosophila melanogaster
Sequence 2:NP_001261810.1 Gene:dysc / 39533 FlyBaseID:FBgn0264006 Length:1254 Species:Drosophila melanogaster


Alignment Length:645 Identity:127/645 - (19%)
Similarity:200/645 - (31%) Gaps:231/645 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDTGSVV--SEPISAHHRAFAKQKSASMTILNPKGCGSAVKYSLHSTAETNQETASTTTTSTHCS 63
            |..|.::  |:|.| |::..:.|.|:|   |:|               ...|:.........|.|
  Fly   715 MSAGPILHRSQPAS-HYQTGSNQSSSS---LSP---------------PQQQQQQQQHYQPHHAS 760

  Fly    64 TTGRRRKGGSLGGTLSS---------------RSTRSESKELRSALQDREAVIQNLRIQLCLGKL 113
            .    |..|.:||.:.|               |.|:...::.....:.|..              
  Fly   761 L----RHLGGIGGNVGSGRHHHHPLGPSQLKFRQTKDNQQQEYGCDEHRTR-------------- 807

  Fly   114 PRPTGPPLDESEKPAAEQKL-NRLKTEAENKR-----IKIKNLK--SALEKLDITDNIDIRIRQA 170
             |.:...|.|.| |.|||:| .:|....:.|.     :..|.::  .::::|....|......|.
  Fly   808 -RGSETLLPEYE-PDAEQELATKLSRSFDMKEEGGTLLGDKGVRRHQSMQRLSAEQNGGSTTEQT 870

  Fly   171 ELEYALGREELQMLSIVEEARA-LQARLEKSKPEAQTLYNIISSGVSLSLHA------VHATSGR 228
            .....         ::|.:.|. |...::|:||    :..|...|.:.:.|.      :|.... 
  Fly   871 HEHNP---------NVVPDHRGNLHITVKKTKP----ILGIAIEGGANTKHPLPRIINIHENGA- 921

  Fly   229 WAVQQRTDQPGFYVEWALEGDGLYKGDRILEINGRLVTGKSKEELQKQV----GNSGKCQ---MV 286
                            |.|..||..|..|||::|..|.|...:|:.:.:    .|..|.:   :|
  Fly   922 ----------------AFEAGGLEVGQLILEVDGTKVEGLHHQEVARLIAECFANREKAEITFLV 970

  Fly   287 VLRKKS-------------------------------------------------VPIPQKQ--- 299
            |..|||                                                 .|||..:   
  Fly   971 VEAKKSNLEPKPTALIFLEAXHLLALPASDPLERQKLEFLYEWGIDLTETPKPMPTPIPLTKAKN 1035

  Fly   300 ---LDQEKENNMRLQHRISYLEEQVRELQTVKEHHPSQQQQQQQQQQQNPQQNPQQNPQQTSSNQ 361
               |..|..||:..|:..|   ..:...|..:..||..||||||||..|.:      ...|:||:
  Fly  1036 PPPLPHELHNNINSQYGSS---AALSNHQPHQHTHPHPQQQQQQQQHSNTK------TPNTNSNK 1091

  Fly   362 SQHVTSISISSPPSTPPEKPLIFQRGNYITTLVGGKPIELMGDDMAST----QTPPGHVTKTLIK 422
            :|           .||             ||          |...|:|    |..||:.|.|..|
  Fly  1092 TQ-----------GTP-------------TT----------GTGAATTGSKQQQQPGNTTNTPTK 1122

  Fly   423 ---------ENTHIDLRDRLSHMYSMPSKSLSASKISINS-DSAYMQHHRRDKERH--RDRQHRE 475
                     |..|........|....|::.....:..... .....|.|.||:::|  ..|:.||
  Fly  1123 ASREATPTREQHHQHATPTREHQQQTPTRQQQLQREQQQQLQREQQQQHHRDRQQHFREQREQRE 1187

  Fly   476 RPRDPLQQQQQLHREHLMSTHARSVEHLN---------HYNGLDRRRDTPRQSESNTLRA 526
            |......:.:|.|..|....|....:|.:         |::....::...|.|.||:.::
  Fly  1188 REYQHEHEHEQHHHHHHHREHHEQHQHQHGHQHHPQHQHHHQYSSQQQHQRYSSSNSYKS 1247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sprtNP_610683.1 PDZ <247..288 CDD:294084 14/47 (30%)
dyscNP_001261810.1 PDZ_signaling 294..380 CDD:238492
PDZ_signaling 466..543 CDD:238492
HN_L-whirlin_R2_like 573..653 CDD:259823
PDZ_signaling 886..971 CDD:238492 21/105 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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