DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sprt and ssp6

DIOPT Version :9

Sequence 1:NP_610683.1 Gene:sprt / 246397 FlyBaseID:FBgn0082585 Length:634 Species:Drosophila melanogaster
Sequence 2:NP_001286952.1 Gene:ssp6 / 38694 FlyBaseID:FBgn0035676 Length:866 Species:Drosophila melanogaster


Alignment Length:724 Identity:142/724 - (19%)
Similarity:239/724 - (33%) Gaps:233/724 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 STHCSTTGRRRKGGSLGGTLSSRSTRSESKELRSALQDREAVIQNLRIQLCLGKLPRPTGPPLDE 123
            ||.|.         |:....||.:|.:.:..:.::   ....:.:|....|..:.|.|       
  Fly     7 STSCQ---------SIATAASSAATTAAAVSISAS---NATSVGSLIAAACQQEQPHP------- 52

  Fly   124 SEKPAAEQKLNRLKTEAENKRIKIKNLKSALEKLDITDNIDIRIRQAELEYA--------LGR-- 178
             .:..::.:...|..::..:.....|...:|.:|....::|  ....|:|||        |||  
  Fly    53 -HQHYSQSQQQHLYHQSHQQASHYVNGTGSLGRLKFHKSLD--ASDEEIEYAQLSRSTHILGRHK 114

  Fly   179 EELQMLSIVEEARALQARLEKSKPEAQTLYNIISSGVSLSLHAVHATSGRWAVQQRTDQPGF--Y 241
            .|..:.|..:|.|..:..:.:.|..        |.|.:|..:.:|        .:|.::...  |
  Fly   115 SERYLASNPDEDRRRRTIIVEKKNN--------SYGFTLQSYGIH--------YKRDEELEMITY 163

  Fly   242 VEWALEGD-----GLYKGDRILEINGR---LVTGKSKEELQKQVGNSGKCQMVVL-----RKKSV 293
            |::...|.     |:.:||.||.|||:   ....|:..|..||...  :.:||||     ||..:
  Fly   164 VDYVEYGGPAYRAGMREGDVILSINGKDMEKADHKTIVEFIKQCDT--RMRMVVLFEDCVRKVDL 226

  Fly   294 PIPQKQLD---QEKENNMR---------------------------------------------- 309
            .:...||.   |:|.|.:.                                              
  Fly   227 HMRYIQLQSMLQQKMNELERVHLRERELLEGKWKTHSLPARKKANANTSPSDGEGVSPTEVAGEA 291

  Fly   310 -----------------LQHRIS----------------YLEEQVR-----------------EL 324
                             .||.:.                ||:...|                 .|
  Fly   292 GFYRPALSTEDVPNIAARQHGVGGPGIIPPPAQFMLTYHYLDPTYRYVLRPTHGSSEEFVDGLGL 356

  Fly   325 QTVKEHHPSQQQQQQQQQQQNPQQNPQQNPQQTSSNQSQHVTSISI---SSPPST-----PPEKP 381
            |.....|....|:...||.::...|....|..|:..|....|..|:   :.||.|     ||.||
  Fly   357 QRSSSDHQPPAQRYVLQQTESVDANSMTQPTTTAPTQYHSTTGGSVKPPAPPPRTCEKHKPPAKP 421

  Fly   382 LIFQR----------GNYITTLVG----------GKP----IELMGDDMAS----TQTPPGHVTK 418
            ...::          |:.....:|          ..|    :.|...|:||    |...|.....
  Fly   422 PKPEKEKSSGKHCHVGHSCNPCLGHFRWKSAEKSAVPAPDNVSLDAYDLASPCCDTHCVPSRRRH 486

  Fly   419 TLIKENTHIDL-RDR---LSHMYSMPSKSLSASKISIN--SDSAYMQHHRRDKERHRDRQHRERP 477
            ...||:||... |||   .|....:..||.|.:..:.|  :.|.:..||......|..:|.:::.
  Fly   487 RQHKEHTHKHKHRDRERVESKEQRVRPKSTSHASPNANGGAGSGHHHHHHHHHHSHEQQQQQQQQ 551

  Fly   478 RDPLQQQQQLHREHLMSTHARSVEHLNHYNGLDRRRDTP--RQSESNTLRAR---LPSDMRSVKS 537
            :   |||||..::.......::|.|.:||   ..:...|  .||:|.:.|:|   |.|.:.|..|
  Fly   552 Q---QQQQQQQQQQQQQQPIQTVPHHHHY---PHQMHNPCQVQSQSGSTRSRYFDLASGLASHCS 610

  Fly   538 LDFDSENE----------SKPATETRTTRPTPPKKPLRLSLQRAQSLQTVELHPCADIERKRPMK 592
            |...:.:|          :..:|:|....||......|  ....:|.|:.|..|    ::::|..
  Fly   611 LHSCTSSEFATGDTASYTTSISTDTLFWDPTSETAQSR--QHSTKSRQSYEQQP----QQQQPTH 669

  Fly   593 RVHHNNNNN 601
            :.||:::::
  Fly   670 QGHHHHHHH 678

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sprtNP_610683.1 PDZ <247..288 CDD:294084 15/48 (31%)
ssp6NP_001286952.1 PDZ_signaling 130..216 CDD:238492 23/103 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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